Factsheet for GSMUA_Achr4P01420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P24480_001	Banana	cytosol	73.64	76.42
KRH07180	Soybean	cytosol	67.27	69.16
EES05437	Sorghum	cytosol	70.91	67.83
PGSC0003DMT400049116	Potato	cytosol	66.36	67.59
Bra025584.1-P	Field mustard	cytosol	67.27	66.67
Solyc06g005260.2.1	Tomato	extracellular	65.45	66.67
CDY36849	Canola	cytosol	67.27	66.67
CDY44566	Canola	cytosol	67.27	66.67
Os04t0508300-01	Rice	extracellular	66.36	65.18
PGSC0003DMT400001269	Potato	cytosol	62.73	63.89
VIT_14s0066g00960.t01	Wine grape	cytosol	63.64	61.4
Zm00001d017240_P001	Maize	cytosol, extracellular	70.91	59.09
EES11094	Sorghum	plastid	68.18	58.59
Os02t0618100-01	Rice	plasma membrane	67.27	57.81
TraesCS2D01G361400.1	Wheat	plastid	67.27	57.36
GSMUA_Achr3P18650_001	Banana	extracellular	50.0	56.7
TraesCS2B01G381600.1	Wheat	plastid	67.27	56.49
Zm00001d003081_P003	Maize	mitochondrion	67.27	56.49
TraesCS2A01G363600.1	Wheat	plastid	65.45	55.81
AT5G40370.2	Thale cress	cytosol	59.09	47.79
CDY15928	Canola	cytosol	64.55	45.51
CDX99634	Canola	cytosol	64.55	45.51
Bra030333.1-P	Field mustard	cytosol	64.55	45.51
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	41.82	37.4
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.0	34.92
GSMUA_Achr1P10400_001	Banana	plastid	40.91	34.09
GSMUA_Achr11P...	Banana	mitochondrion	38.18	24.85
GSMUA_Achr1P23530_001	Banana	extracellular	28.18	22.63

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G01420_001
EnsemblPlants:GSMUA_Achr4P01420_001	EnsemblPlants:GSMUA_Achr4T01420_001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M0SK59	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI000296B595	SEG:seg

Description

Glutaredoxin [Source:GMGC_GENE;Acc:GSMUA_Achr4G01420_001]

Coordinates

chr4:+:1194190..1197592

Molecular Weight (calculated)

11760.3 Da

IEP (calculated)

8.847

GRAVY (calculated)

0.079

Length

110 amino acids

Sequence
(BLAST)

001: MALVKAKQIV SSNPVVVFSK SYCPYCTRVK QLLTQLGAKY KAIELDVESD GPQIQEALAE WTGQRTVPNV FVGGKHIGGC DNTMASHGKG ELVPLLVDAG
101: AVARAAYRVV

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.