Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36849 | Canola | cytosol | 57.35 | 70.27 |
| CDY44566 | Canola | cytosol | 56.62 | 69.37 |
| Bra025584.1-P | Field mustard | cytosol | 56.62 | 69.37 |
| PGSC0003DMT400049116 | Potato | cytosol | 51.47 | 64.81 |
| Solyc06g005260.2.1 | Tomato | extracellular | 51.47 | 64.81 |
| Os04t0508300-01 | Rice | extracellular | 51.47 | 62.5 |
| GSMUA_Achr1P24480_001 | Banana | cytosol | 48.53 | 62.26 |
| KRH07180 | Soybean | cytosol | 48.53 | 61.68 |
| VIT_14s0066g00960.t01 | Wine grape | cytosol | 50.0 | 59.65 |
| GSMUA_Achr4P01420_001 | Banana | cytosol | 47.79 | 59.09 |
| PGSC0003DMT400001269 | Potato | cytosol | 46.32 | 58.33 |
| EES05437 | Sorghum | cytosol | 48.53 | 57.39 |
| TraesCS2A01G363600.1 | Wheat | plastid | 52.21 | 55.04 |
| TraesCS2D01G361400.1 | Wheat | plastid | 50.0 | 52.71 |
| TraesCS2B01G381600.1 | Wheat | plastid | 50.74 | 52.67 |
| EES11094 | Sorghum | plastid | 49.26 | 52.34 |
| AT5G63030.1 | Thale cress | cytosol | 47.79 | 52.0 |
| Os02t0618100-01 | Rice | plasma membrane | 48.53 | 51.56 |
| Zm00001d003081_P003 | Maize | mitochondrion | 48.53 | 50.38 |
| Zm00001d017240_P001 | Maize | cytosol, extracellular | 48.53 | 50.0 |
| CDY15928 | Canola | cytosol | 47.79 | 41.67 |
| CDX99634 | Canola | cytosol | 47.79 | 41.67 |
| Bra030333.1-P | Field mustard | cytosol | 47.79 | 41.67 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 30.15 | 30.37 |
| AT1G77370.2 | Thale cress | extracellular | 30.15 | 26.28 |
| AT4G28730.1 | Thale cress | plastid | 32.35 | 25.29 |
| AT2G20270.2 | Thale cress | plastid | 33.82 | 22.33 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:834035 | ProteinID:AED94539.1 | ArrayExpress:AT5G40370 | EnsemblPlantsGene:AT5G40370 |
| RefSeq:AT5G40370 | TAIR:AT5G40370 | RefSeq:AT5G40370-TAIR-G | EnsemblPlants:AT5G40370.2 | TAIR:AT5G40370.2 | Unigene:At.27442 |
| UniProt:B3H604 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0048046 |
| GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | RefSeq:NP_001119339.1 |
| PFAM:PF00462 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF122 |
| SUPFAM:SSF52833 | TIGRFAMs:TIGR02180 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI000173953C | : |
Description
Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
Coordinates
chr5:-:16147594..16149198
Molecular Weight (calculated)
14908.9 Da
IEP (calculated)
5.661
GRAVY (calculated)
0.030
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSIMCVSSW KFYTMNDSWM YLDAFVYQWM ILSYLIGNFS GICSKTYCPY CVRVKELLQQ LGAKFKAVEL DTESDGSQIQ SGLAEWTGQR TVPNVFIGGN
101: HIGGCDATSN LHKDGKLVPL LTEAGAIAGK TATTSA
101: HIGGCDATSN LHKDGKLVPL LTEAGAIAGK TATTSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.