Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
- mitochondrion 2
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g005260.2.1 | Tomato | extracellular | 71.93 | 75.93 |
| PGSC0003DMT400049116 | Potato | cytosol | 71.93 | 75.93 |
| GSMUA_Achr1P24480_001 | Banana | cytosol | 68.42 | 73.58 |
| KRH07180 | Soybean | cytosol | 67.54 | 71.96 |
| Os04t0508300-01 | Rice | extracellular | 70.18 | 71.43 |
| PGSC0003DMT400001269 | Potato | cytosol | 66.67 | 70.37 |
| Bra025584.1-P | Field mustard | cytosol | 68.42 | 70.27 |
| CDY44566 | Canola | cytosol | 68.42 | 70.27 |
| CDY36849 | Canola | cytosol | 67.54 | 69.37 |
| EES05437 | Sorghum | cytosol | 66.67 | 66.09 |
| GSMUA_Achr4P01420_001 | Banana | cytosol | 61.4 | 63.64 |
| TraesCS2A01G363600.1 | Wheat | plastid | 69.3 | 61.24 |
| TraesCS2D01G361400.1 | Wheat | plastid | 68.42 | 60.47 |
| TraesCS2B01G381600.1 | Wheat | plastid | 69.3 | 60.31 |
| Os02t0618100-01 | Rice | plasma membrane | 67.54 | 60.16 |
| VIT_17s0000g08670.t01 | Wine grape | cytosol | 64.91 | 59.68 |
| EES11094 | Sorghum | plastid | 65.79 | 58.59 |
| Zm00001d003081_P003 | Maize | mitochondrion | 66.67 | 58.02 |
| Zm00001d017240_P001 | Maize | cytosol, extracellular | 64.91 | 56.06 |
| AT5G40370.2 | Thale cress | cytosol | 59.65 | 50.0 |
| Bra030333.1-P | Field mustard | cytosol | 64.91 | 47.44 |
| CDX99634 | Canola | cytosol | 64.91 | 47.44 |
| CDY15928 | Canola | cytosol | 64.91 | 47.44 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 38.6 | 32.35 |
| VIT_04s0023g02800.t01 | Wine grape | extracellular, vacuole | 34.21 | 30.47 |
| VIT_07s0005g04860.t01 | Wine grape | plastid | 42.98 | 27.53 |
Protein Annotations
| EntrezGene:100244121 | wikigene:100244121 | MapMan:18.8.2 | Gene3D:3.40.30.10 | UniProt:A5B8K3 | EMBL:AM450423 |
| ProteinID:CAN74292 | ProteinID:CAN74292.1 | ProteinID:CBI34892 | ProteinID:CBI34892.3 | EMBL:FN596252 | InterPro:GLR_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016020 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0048046 | GO:GO:0055114 | InterPro:Glutaredoxin |
| InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | EntrezGene:LOC100244121 | wikigene:LOC100244121 | PFAM:PF00462 |
| PRINTS:PR00160 | ScanProsite:PS00195 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF122 | SUPFAM:SSF52833 |
| TIGR:TC59398 | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001520676 | ArrayExpress:VIT_14s0066g00960 | EnsemblPlantsGene:VIT_14s0066g00960 |
| EnsemblPlants:VIT_14s0066g00960.t01 | RefSeq:XP_002276266 | RefSeq:XP_002276266.1 | : | : | : |
Description
No Description!
Coordinates
chr14:+:27413825..27415107
Molecular Weight (calculated)
11808.1 Da
IEP (calculated)
5.006
GRAVY (calculated)
0.150
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQKAQEMV SSNPVVVFSK TYCPFCVSVK KLLSELGATF KVVELDTESD GADLQSALAG WTGQRTVPNV FIGGKHIGGC DTATALHSDG KLVPLLTEAG
101: AITSSSNEGS SVTC
101: AITSSSNEGS SVTC
001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A
101: AIAGKTATTS A
Arabidopsis Description
Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.