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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • vacuole 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003081_P003 Maize mitochondrion 94.53 92.37
Os04t0508300-01 Rice extracellular 73.44 83.93
TraesCS2D01G361400.1 Wheat plastid 82.81 82.17
TraesCS2B01G381600.1 Wheat plastid 83.59 81.68
TraesCS2A01G363600.1 Wheat plastid 80.47 79.84
KRH07180 Soybean cytosol 61.72 73.83
GSMUA_Achr1P24480_001 Banana cytosol 60.94 73.58
EES05437 Sorghum cytosol 64.06 71.3
Solyc06g005260.2.1 Tomato extracellular 59.38 70.37
PGSC0003DMT400049116 Potato cytosol 59.38 70.37
GSMUA_Achr4P01420_001 Banana cytosol 58.59 68.18
PGSC0003DMT400001269 Potato cytosol 56.25 66.67
VIT_14s0066g00960.t01 Wine grape cytosol 58.59 65.79
CDY44566 Canola cytosol 55.47 63.96
CDY36849 Canola cytosol 55.47 63.96
Bra025584.1-P Field mustard cytosol 55.47 63.96
AT5G40370.2 Thale cress cytosol 52.34 49.26
CDY15928 Canola cytosol 51.56 42.31
CDX99634 Canola cytosol 51.56 42.31
Bra030333.1-P Field mustard cytosol 51.56 42.31
EER88767 Sorghum mitochondrion 35.16 33.33
EES07538 Sorghum endoplasmic reticulum, extracellular 32.03 32.54
OQU80669 Sorghum mitochondrion, plastid 30.47 25.32
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EntrezGene:8075910UniProt:C5YBX1EnsemblPlants:EES11094ProteinID:EES11094
ProteinID:EES11094.1InterPro:GLR_ASGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlutaredoxinInterPro:Glutaredoxin_euk/vir
InterPro:Glutaredoxin_subgrInterPro:IPR002109PFAM:PF00462PRINTS:PR00160ScanProsite:PS00195PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF122EnsemblPlantsGene:SORBI_3006G141700SUPFAM:SSF52833unigene:Sbi.1429TIGRFAMs:TIGR02180
InterPro:Thioredoxin-like_sfUniParc:UPI00018C72FBRefSeq:XP_002446766.1SEG:seg::
Description
hypothetical protein
Coordinates
chr6:+:50383073..50385878
Molecular Weight (calculated)
13401.1 Da
IEP (calculated)
7.187
GRAVY (calculated)
-0.023
Length
128 amino acids
Sequence
(BLAST)
001: MGIASSSSSN PESRAMALAK AKEIVASAPL VVFSKTSCPF CVRVKQLFEK LGASYKAIEL DVESDGPELQ NALKEWTGQR TVPNVFINGK HIGGCDDTMA
101: LNNDGKLVPL LTEAGAIAGS TSKTTVTA
Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)
001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A
Arabidopsis Description
Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.