Factsheet for GSMUA_Achr1P24480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07180	Soybean	cytosol	75.47	74.77
PGSC0003DMT400049116	Potato	cytosol	75.47	74.07
GSMUA_Achr4P01420_001	Banana	cytosol	76.42	73.64
Os04t0508300-01	Rice	extracellular	77.36	73.21
Solyc06g005260.2.1	Tomato	extracellular	74.53	73.15
EES05437	Sorghum	cytosol	74.53	68.7
PGSC0003DMT400001269	Potato	cytosol	69.81	68.52
VIT_14s0066g00960.t01	Wine grape	cytosol	73.58	68.42
Bra025584.1-P	Field mustard	cytosol	70.75	67.57
CDY36849	Canola	cytosol	70.75	67.57
CDY44566	Canola	cytosol	70.75	67.57
EES11094	Sorghum	plastid	73.58	60.94
GSMUA_Achr3P18650_001	Banana	extracellular	55.66	60.82
Os02t0618100-01	Rice	plasma membrane	72.64	60.16
TraesCS2D01G361400.1	Wheat	plastid	72.64	59.69
Zm00001d003081_P003	Maize	mitochondrion	73.58	59.54
TraesCS2B01G381600.1	Wheat	plastid	72.64	58.78
Zm00001d017240_P001	Maize	cytosol, extracellular	72.64	58.33
TraesCS2A01G363600.1	Wheat	plastid	70.75	58.14
AT5G40370.2	Thale cress	cytosol	62.26	48.53
CDY15928	Canola	cytosol	63.21	42.95
CDX99634	Canola	cytosol	63.21	42.95
Bra030333.1-P	Field mustard	cytosol	63.21	42.95
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	44.34	38.21
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.45	35.71
GSMUA_Achr1P10400_001	Banana	plastid	41.51	33.33
GSMUA_Achr1P23530_001	Banana	extracellular	32.08	24.82
GSMUA_Achr11P...	Banana	mitochondrion	38.68	24.26

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G24480_001
EnsemblPlants:GSMUA_Achr1P24480_001	EnsemblPlants:GSMUA_Achr1T24480_001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M0S2Q5	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI000295BDB1	:

Description

Glutaredoxin-C6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G24480_001]

Coordinates

chr1:+:18875466..18878224

Molecular Weight (calculated)

11312.7 Da

IEP (calculated)

8.062

GRAVY (calculated)

0.002

Length

106 amino acids

Sequence
(BLAST)

001: MALEKAKETV SSNPVVVFSK TFCPFCVRVK KLLDQLGARY KAIELDVESD GSDIQAALAE WTGQRTVPNV FIGGKHIGGC DDTLAKHQQG KLKPLLIEAG
101: ALASAA

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.