Factsheet for GSMUA_Achr1P11150_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr4P00500_001
GSMUA_Achr6P02720_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28730.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT4G28730.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT4G28730.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT4G28730.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944
AT4G28730.1	GSMUA_Achr10P...	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G064020.2	Barley	extracellular	38.21	58.02
Zm00001d031856_P002	Maize	plastid	77.24	56.89
OQU80669	Sorghum	mitochondrion, plastid	70.73	56.49
TraesCS7B01G185700.1	Wheat	plastid	74.8	54.12
TraesCS7D01G289300.1	Wheat	plastid	73.98	53.53
TraesCS7A01G293400.1	Wheat	plastid	73.98	53.53
Zm00001d049886_P001	Maize	plastid	76.42	52.81
KRH32275	Soybean	plastid	66.67	49.4
KRH19662	Soybean	plastid	66.67	49.4
VIT_07s0005g04860.t01	Wine grape	plastid	69.92	48.31
AT4G28730.1	Thale cress	plastid	68.29	48.28
CDX97456	Canola	plastid	70.73	48.07
CDY50922	Canola	plastid	69.92	47.78
KRH55649	Soybean	plastid	63.41	47.56
CDY68269	Canola	plastid	69.11	47.49
Bra010351.1-P	Field mustard	plastid	69.11	47.49
CDX92892	Canola	plastid	68.29	47.19
Solyc06g083690.2.1	Tomato	plastid	69.92	46.99
CDY06875	Canola	plastid	65.85	46.29
Bra024183.1-P	Field mustard	plastid	61.79	45.24
Bra011056.1-P	Field mustard	plastid	63.41	45.09
CDY35215	Canola	plastid	63.41	45.09
GSMUA_Achr1P24480_001	Banana	cytosol	38.21	44.34
GSMUA_Achr4P01420_001	Banana	cytosol	37.4	41.82
CDY05731	Canola	plastid	58.54	41.38
CDY31980	Canola	plastid	56.1	39.88
Bra036458.1-P	Field mustard	plastid	50.41	37.13
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.4	36.51
GSMUA_Achr1P10400_001	Banana	plastid	39.02	36.36
Os08t0565800-01	Rice	cytosol	50.41	35.43
GSMUA_Achr3P18650_001	Banana	extracellular	27.64	35.05
AT2G20270.2	Thale cress	plastid	58.54	34.95
PGSC0003DMT400051717	Potato	plastid	69.92	32.7
HORVU7Hr1G064050.1	Barley	mitochondrion	40.65	29.24
GSMUA_Achr1P23530_001	Banana	extracellular	27.64	24.82
GSMUA_Achr11P...	Banana	mitochondrion	30.89	22.49

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G11150_001	EnsemblPlants:GSMUA_Achr1P11150_001
EnsemblPlants:GSMUA_Achr1T11150_001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M0RYX4
PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF14	SUPFAM:SSF52833
TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI000295548A	SEG:seg	:	:

Description

Monothiol glutaredoxin-S10 [Source:GMGC_GENE;Acc:GSMUA_Achr1G11150_001]

Coordinates

chr1:+:8521271..8527762

Molecular Weight (calculated)

13312.0 Da

IEP (calculated)

8.742

GRAVY (calculated)

-0.284

Length

123 amino acids

Sequence
(BLAST)

001: MSSSSPSPSS SSSSFGSRLE ESVKKTIADH PIVIYSKTWC SYSMEVKSLF KRIGVQPLVI ELDELGPQGP QVQKALERLT GQHTVPNVFI GGKHIGGCTD
101: TVKLHQKGEL TTLLSKLNIG TEN

Best Arabidopsis Sequence Match ( AT4G28730.1 )
(BLAST)

001: MAVTAFNTLK LVSSSLDPIP SVSCSSYSFS LIYVGSPYKR CLKQSCSVRA MTSSSSAASS SSSSFGSRME ESIRKTVTEN TVVIYSKTWC SYCTEVKTLF
101: KRLGVQPLVV ELDQLGPQGP QLQKVLERLT GQHTVPNVFV CGKHIGGCTD TVKLNRKGDL ELMLAEANGK NGQS

Arabidopsis Description

GRXC5GrxC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UXL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.