Factsheet for Bra011056.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013872.1-P
Bra018126.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28730.1	Bra018126.1-P	AT3G47620.1	21798944
AT4G28730.1	Bra013872.1-P	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35215	Canola	plastid	100.0	100.0
Bra024183.1-P	Field mustard	plastid	75.72	77.98
AT4G28730.1	Thale cress	plastid	75.72	75.29
Bra010351.1-P	Field mustard	plastid	76.88	74.3
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	45.09	63.41
HORVU7Hr1G064020.2	Barley	extracellular	26.59	56.79
KRH32275	Soybean	plastid	53.18	55.42
KRH55649	Soybean	plastid	50.87	53.66
VIT_07s0005g04860.t01	Wine grape	plastid	54.34	52.81
Zm00001d031856_P002	Maize	plastid	50.29	52.1
KRH19662	Soybean	plastid	49.13	51.2
OQU80669	Sorghum	mitochondrion, plastid	44.51	50.0
Solyc06g083690.2.1	Tomato	plastid	52.6	49.73
Bra036458.1-P	Field mustard	plastid	47.98	49.7
TraesCS7B01G185700.1	Wheat	plastid	48.55	49.41
TraesCS7A01G293400.1	Wheat	plastid	48.55	49.41
TraesCS7D01G289300.1	Wheat	plastid	48.55	49.41
Zm00001d049886_P001	Maize	plastid	49.13	47.75
Bra025584.1-P	Field mustard	cytosol	30.06	46.85
Bra035868.1-P	Field mustard	cytosol	28.32	42.24
Bra020106.1-P	Field mustard	endoplasmic reticulum	31.21	40.6
Bra038602.1-P	Field mustard	cytosol	27.75	40.0
Bra035867.1-P	Field mustard	cytosol	28.32	39.2
Bra002306.1-P	Field mustard	golgi	28.32	37.12
PGSC0003DMT400051717	Potato	plastid	52.02	34.22
Os08t0565800-01	Rice	cytosol	32.95	32.57
Bra037174.1-P	Field mustard	extracellular, vacuole	24.86	32.09
Bra030333.1-P	Field mustard	cytosol	27.75	30.77
HORVU7Hr1G064050.1	Barley	mitochondrion	26.01	26.32

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra011056	EnsemblPlants:Bra011056.1	EnsemblPlants:Bra011056.1-P	InterPro:GLR_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M4D3K2	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00194	ScanProsite:PS00195	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF14	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
UniParc:UPI00025458E9	SEG:seg	:	:	:	:

Description

AT4G28730 (E=3e-040) | glutaredoxin family protein

Coordinates

chrA01:-:4183284..4184563

Molecular Weight (calculated)

18744.6 Da

IEP (calculated)

9.018

GRAVY (calculated)

-0.162

Length

173 amino acids

Sequence
(BLAST)

001: MAVTAFNPLK LASSPRDSFP SISSSTSYSV SLISFVRIRN SVGSPLKKCL KQTCSVRAMS SSSFESGMEE SVKKTVNDNT VVVYSKTWCP YCSEVKTLFK
101: RLGVQPLVVE LDELGPQGTQ LQKVLETLTG QRTVPSVFVG GKHIGGCTDT VNLNRKGELE LMLAEANGKT DQT

Best Arabidopsis Sequence Match ( AT4G28730.1 )
(BLAST)

001: MAVTAFNTLK LVSSSLDPIP SVSCSSYSFS LIYVGSPYKR CLKQSCSVRA MTSSSSAASS SSSSFGSRME ESIRKTVTEN TVVIYSKTWC SYCTEVKTLF
101: KRLGVQPLVV ELDQLGPQGP QLQKVLERLT GQHTVPNVFV CGKHIGGCTD TVKLNRKGDL ELMLAEANGK NGQS

Arabidopsis Description

GRXC5GrxC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UXL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.