Factsheet for Bra035868.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
plastid 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16750	Canola	cytosol	98.28	98.28
Bra035867.1-P	Field mustard	cytosol	82.76	76.8
Bra038602.1-P	Field mustard	cytosol	77.59	75.0
VIT_17s0000g08670.t01	Wine grape	cytosol	68.1	63.71
Bra025584.1-P	Field mustard	cytosol	56.9	59.46
Solyc03g112770.2.1	Tomato	plastid	63.79	59.2
PGSC0003DMT400046764	Potato	plastid	61.21	56.8
GSMUA_Achr3P18650_001	Banana	extracellular	44.83	53.61
Bra030333.1-P	Field mustard	cytosol	56.9	42.31
Bra002306.1-P	Field mustard	golgi	39.66	34.85
Bra020106.1-P	Field mustard	endoplasmic reticulum	38.79	33.83
Bra037174.1-P	Field mustard	extracellular, vacuole	35.34	30.6
Bra011056.1-P	Field mustard	plastid	42.24	28.32
Bra010351.1-P	Field mustard	plastid	42.24	27.37
Bra036458.1-P	Field mustard	plastid	36.21	25.15
Bra024183.1-P	Field mustard	plastid	34.48	23.81

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra035868	EnsemblPlants:Bra035868.1	EnsemblPlants:Bra035868.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M4F468
PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF73	SUPFAM:SSF52833
TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI0002542109	:	:	:

Description

AT5G63030 (E=5e-050) | glutaredoxin, putative

Coordinates

chrA09:-:3224099..3225025

Molecular Weight (calculated)

12643.6 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.144

Length

116 amino acids

Sequence
(BLAST)

001: MSKEKMEKVM NKAKEIVSSY PVVVFSKTYC GYCQKVKKLL TQLGADFEVL ELDEMSGGGE IQSALSKWTG QRTVPNVFIK GKHIGGCDSV MESNQKGKLV
101: PLLIEAGALG KISSKL

Best Arabidopsis Sequence Match ( AT5G63030.1 )
(BLAST)

001: MGSMFSGNRM SKEEMEVVVN KAKEIVSAYP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ TTVPNVFIKG NHIGGCDRVM
101: ETNKQGKLVP LLTEAGAIAD NSSQL

Arabidopsis Description

GRXC1Glutaredoxin-C1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8T2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.