Factsheet for Bra036458.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31980	Canola	plastid	98.2	94.8
AT2G20270.2	Thale cress	plastid	67.07	54.37
KRH32275	Soybean	plastid	50.3	50.6
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	37.13	50.41
Bra024183.1-P	Field mustard	plastid	48.5	48.21
KRH55649	Soybean	plastid	47.31	48.17
Bra011056.1-P	Field mustard	plastid	49.7	47.98
KRH19662	Soybean	plastid	47.31	47.59
VIT_07s0005g04860.t01	Wine grape	plastid	49.7	46.63
OQU80669	Sorghum	mitochondrion, plastid	41.32	44.81
HORVU7Hr1G064020.2	Barley	extracellular	21.56	44.44
Bra010351.1-P	Field mustard	plastid	46.71	43.58
Solyc06g083690.2.1	Tomato	plastid	47.31	43.17
Zm00001d031856_P002	Maize	plastid	43.11	43.11
TraesCS7B01G185700.1	Wheat	plastid	42.52	41.76
Bra025584.1-P	Field mustard	cytosol	27.54	41.44
TraesCS7D01G289300.1	Wheat	plastid	41.92	41.18
TraesCS7A01G293400.1	Wheat	plastid	41.92	41.18
Zm00001d049886_P001	Maize	plastid	41.92	39.33
Bra035868.1-P	Field mustard	cytosol	25.15	36.21
Bra035867.1-P	Field mustard	cytosol	25.75	34.4
Bra038602.1-P	Field mustard	cytosol	24.55	34.17
Bra020106.1-P	Field mustard	endoplasmic reticulum	26.35	33.08
Bra002306.1-P	Field mustard	golgi	23.95	30.3
PGSC0003DMT400051717	Potato	plastid	47.31	30.04
Os08t0565800-01	Rice	cytosol	29.34	28.0
Bra037174.1-P	Field mustard	extracellular, vacuole	20.96	26.12
Bra030333.1-P	Field mustard	cytosol	23.95	25.64
HORVU7Hr1G064050.1	Barley	mitochondrion	25.15	24.56

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra036458	EnsemblPlants:Bra036458.1	EnsemblPlants:Bra036458.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M4F5V2
PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF14	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0002540EC0	SEG:seg	:	:	:

Description

AT2G20270 (E=2e-035) | glutaredoxin family protein

Coordinates

chrA07:+:278687..279735

Molecular Weight (calculated)

18141.8 Da

IEP (calculated)

9.612

GRAVY (calculated)

-0.015

Length

167 amino acids

Sequence
(BLAST)

001: MAASANLGSL RSTTTSLFFS NRPFSLSMLR SSLVLRTCLI KPTPLRLLVS WPPHHGSSVR AMSSSSSSSS LEETVKTTVA ENPVVVYSKS WCSYSSEVKS
101: LFNGLQVKPL VVELDQLGAE GSQLQTVLEK LTGQFTVPNV FIDTLQLYNK GQLEPMLAEA NAKTGRT

Best Arabidopsis Sequence Match ( AT2G20270.1 )
(BLAST)

001: MVAATVNLAN MTWTSLNSNP AISFSMLSGI RNLGMLPFRR CLKPTVIGIA SWPPLRCSSV KAMSSSSSSS GSTLEETVKT TVAENPVVVY SKTWCSYSSQ
101: VKSLFKSLQV EPLVVELDQL GSEGSQLQNV LEKITGQYTV PNVFIGGKHI GGCSDTLQLH NKGELEAILA EANGKNGQT

Arabidopsis Description

Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IUG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.