Factsheet for Bra002306.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
cytosol 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16539	Canola	endoplasmic reticulum	98.48	98.48
CDX92459	Canola	endoplasmic reticulum, golgi	93.94	95.38
Bra020106.1-P	Field mustard	endoplasmic reticulum	84.85	84.21
AT5G20500.1	Thale cress	endoplasmic reticulum	84.09	82.22
HORVU7Hr1G009480.1	Barley	cytosol	25.0	75.0
HORVU7Hr1G110720.1	Barley	cytosol	45.45	72.29
HORVU3Hr1G028600.1	Barley	cytosol	32.58	68.25
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	67.42	65.44
Os06t0659500-01	Rice	cytosol, plasma membrane	37.12	63.64
KRH37371	Soybean	endoplasmic reticulum	62.88	62.41
KRH12368	Soybean	endoplasmic reticulum	61.36	60.45
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	64.39	59.44
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.06	58.73
Solyc11g069860.1.1	Tomato	plastid	62.12	57.34
EER88767	Sorghum	mitochondrion	58.33	57.04
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	58.33	57.04
TraesCS7B01G404000.1	Wheat	mitochondrion, plastid	58.33	57.04
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	58.33	57.04
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	59.09	56.93
Zm00001d046900_P003	Maize	mitochondrion	56.82	55.56
GSMUA_Achr1P10400_001	Banana	plastid	54.55	54.55
Bra037174.1-P	Field mustard	extracellular, vacuole	50.76	50.0
Bra038602.1-P	Field mustard	cytosol	36.36	40.0
Bra035868.1-P	Field mustard	cytosol	34.85	39.66
Bra025584.1-P	Field mustard	cytosol	33.33	39.64
GSMUA_Achr1P23530_001	Banana	extracellular	40.91	39.42
Bra035867.1-P	Field mustard	cytosol	36.36	38.4
Bra030333.1-P	Field mustard	cytosol	34.09	28.85
Bra011056.1-P	Field mustard	plastid	37.12	28.32
Bra010351.1-P	Field mustard	plastid	35.61	26.26
Bra036458.1-P	Field mustard	plastid	30.3	23.95
Bra024183.1-P	Field mustard	plastid	30.3	23.81

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra002306	EnsemblPlants:Bra002306.1	EnsemblPlants:Bra002306.1-P	InterPro:GLR_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M4CDM5	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI0002544C16
SEG:seg	:	:	:	:	:

Description

AT5G20500 (E=1e-051) | glutaredoxin, putative

Coordinates

chrA10:-:10391371..10392420

Molecular Weight (calculated)

14271.1 Da

IEP (calculated)

6.943

GRAVY (calculated)

0.020

Length

132 amino acids

Sequence
(BLAST)

001: MTMIRSISML TLLVTLAASI SMVSSSSSAD FVKKTISSHK IVIFSKSYCP YCRRAKSVFS ELNQVPHVVE LDEREDGGSI QSALGEIVGR RTVPQVFING
101: KHIGGSDDTV DAHESGELAK LLGVSENTRA EL

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.