Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G028600.1 | Barley | cytosol | 90.91 | 63.49 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 97.73 | 51.81 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 84.09 | 48.05 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 97.73 | 31.85 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 97.73 | 31.85 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 97.73 | 31.39 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 95.45 | 31.11 |
| HORVU7Hr1G064020.2 | Barley | extracellular | 52.27 | 28.4 |
| EER88767 | Sorghum | mitochondrion | 86.36 | 28.15 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 77.27 | 26.98 |
| Zm00001d046900_P003 | Maize | mitochondrion | 81.82 | 26.67 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 79.55 | 25.93 |
| KRH37371 | Soybean | endoplasmic reticulum | 77.27 | 25.56 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 75.0 | 25.38 |
| KRH12368 | Soybean | endoplasmic reticulum | 77.27 | 25.37 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 77.27 | 25.0 |
| Bra002306.1-P | Field mustard | golgi | 75.0 | 25.0 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 75.0 | 25.0 |
| CDY16539 | Canola | endoplasmic reticulum | 75.0 | 25.0 |
| Bra020106.1-P | Field mustard | endoplasmic reticulum | 72.73 | 24.06 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 72.73 | 23.36 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 72.73 | 22.38 |
| Solyc11g069860.1.1 | Tomato | plastid | 70.45 | 21.68 |
| HORVU6Hr1G061200.1 | Barley | cytosol, plastid | 50.0 | 12.87 |
| CDY45086 | Canola | endoplasmic reticulum | 52.27 | 12.5 |
| HORVU7Hr1G064050.1 | Barley | mitochondrion | 9.09 | 2.34 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.2 | UniProt:A0A287VHB2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| EnsemblPlantsGene:HORVU7Hr1G009480 | EnsemblPlants:HORVU7Hr1G009480.1 | InterPro:IPR002109 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000B46D0B4 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:13022608..13023837
Molecular Weight (calculated)
4773.7 Da
IEP (calculated)
5.694
GRAVY (calculated)
-0.243
Length
44 amino acids
Sequence
(BLAST)
(BLAST)
1: MVGKRTVPQV FIRGKHLGGS DDTVDAYESG ELAKLLNISV KDDL
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.