Factsheet for Zm00001d046900_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88767	Sorghum	mitochondrion	94.81	94.81
Os06t0659500-01	Rice	cytosol, plasma membrane	50.37	88.31
HORVU7Hr1G110720.1	Barley	cytosol	52.59	85.54
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	82.96	82.96
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	82.96	82.96
HORVU7Hr1G009480.1	Barley	cytosol	26.67	81.82
TraesCS7B01G404000.1	Wheat	mitochondrion, plastid	81.48	81.48
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	82.22	81.02
HORVU3Hr1G028600.1	Barley	cytosol	34.81	74.6
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.93	70.63
GSMUA_Achr1P10400_001	Banana	plastid	62.96	64.39
CDX92459	Canola	endoplasmic reticulum, golgi	56.3	58.46
KRH37371	Soybean	endoplasmic reticulum	57.04	57.89
AT5G20500.1	Thale cress	endoplasmic reticulum	57.04	57.04
Bra002306.1-P	Field mustard	golgi	55.56	56.82
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	57.04	56.62
CDY16539	Canola	endoplasmic reticulum	54.07	55.3
KRH12368	Soybean	endoplasmic reticulum	54.81	55.22
Bra020106.1-P	Field mustard	endoplasmic reticulum	53.33	54.14
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	54.81	51.75
Solyc11g069860.1.1	Tomato	plastid	54.07	51.05
GSMUA_Achr1P23530_001	Banana	extracellular	44.44	43.8
Zm00001d017417_P001	Maize	cytosol	36.3	37.69
CDY45086	Canola	endoplasmic reticulum	48.15	35.33
Zm00001d003081_P003	Maize	mitochondrion	34.07	35.11
Zm00001d017240_P001	Maize	cytosol, extracellular	30.37	31.06
Zm00001d049886_P001	Maize	plastid	39.26	29.78
Zm00001d031856_P002	Maize	plastid	36.3	29.34

Protein Annotations

EntrezGene:100282495	MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:AQL05167.1	UniProt:B6T828	EMBL:EU961143
InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0005794	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116
SUPFAM:SSF52833	TIGRFAMs:TIGR02180	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI000182D10D	EnsemblPlantsGene:Zm00001d046900
EnsemblPlants:Zm00001d046900_P003	EnsemblPlants:Zm00001d046900_T003	SEG:seg	:	:	:

Description

Grx_C4-glutaredoxin subgroup I

Coordinates

chr9:-:109553702..109556819

Molecular Weight (calculated)

14570.6 Da

IEP (calculated)

8.216

GRAVY (calculated)

0.064

Length

135 amino acids

Sequence
(BLAST)

001: MVALLGRRIG VAAAAAAFIA LVAFGSASSS PKSFVKSTVS AHDVVIFSKS YCPYCKRAKA VFKELELKKE PYVVELDQRE DGSEIQDALL EIVGRRTVPQ
101: VFVHGKHLGG SDDTVDSYES GKLARLLNIG VKDDL

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.