Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020106.1-P | Field mustard | endoplasmic reticulum | 63.04 | 87.22 |
| CDY16539 | Canola | endoplasmic reticulum | 54.89 | 76.52 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 55.98 | 76.3 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 53.8 | 76.15 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 44.02 | 59.56 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 26.09 | 57.83 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 23.37 | 55.84 |
| KRH37371 | Soybean | endoplasmic reticulum | 40.22 | 55.64 |
| KRH12368 | Soybean | endoplasmic reticulum | 39.67 | 54.48 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.41 | 53.17 |
| Solyc11g069860.1.1 | Tomato | plastid | 40.76 | 52.45 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 40.76 | 52.45 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 12.5 | 52.27 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 17.39 | 50.79 |
| EER88767 | Sorghum | mitochondrion | 35.87 | 48.89 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 34.78 | 48.48 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 35.87 | 48.18 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 35.33 | 48.15 |
| Zm00001d046900_P003 | Maize | mitochondrion | 35.33 | 48.15 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 35.33 | 48.15 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 35.33 | 48.15 |
| CDY18599 | Canola | extracellular, vacuole | 34.24 | 47.01 |
| CDX81399 | Canola | extracellular, plasma membrane | 34.24 | 46.32 |
| CDY36849 | Canola | cytosol | 22.83 | 37.84 |
| CDY44566 | Canola | cytosol | 22.83 | 37.84 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 27.72 | 37.23 |
| CDY00348 | Canola | cytosol | 23.37 | 35.83 |
| CDY16750 | Canola | cytosol | 22.28 | 35.34 |
| CDX87276 | Canola | cytosol | 23.91 | 35.2 |
| CDY16749 | Canola | cytosol | 23.91 | 35.2 |
| CDX84377 | Canola | cytosol | 22.83 | 35.0 |
| CDX87275 | Canola | cytosol | 21.2 | 33.62 |
| CDY15928 | Canola | cytosol | 25.0 | 29.49 |
| CDX99634 | Canola | cytosol | 24.46 | 28.85 |
| CDY06875 | Canola | plastid | 27.17 | 28.57 |
| CDY35215 | Canola | plastid | 26.63 | 28.32 |
| CDY31980 | Canola | plastid | 25.54 | 27.17 |
| CDX97456 | Canola | plastid | 26.09 | 26.52 |
| CDY05731 | Canola | plastid | 24.46 | 25.86 |
| CDY68269 | Canola | plastid | 25.0 | 25.7 |
| CDX92892 | Canola | plastid | 23.91 | 24.72 |
| CDY50922 | Canola | plastid | 23.91 | 24.44 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078I5D0 | UniProt:A0A078I5D0 | EnsemblPlants:CDY45086 | ProteinID:CDY45086 |
| ProteinID:CDY45086.1 | InterPro:GLR_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00081365001 | InterPro:Glutaredoxin |
| InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 | ScanProsite:PS00195 | PFscan:PS51354 |
| PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EF38EF |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g04900DBnaA02g04900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5D0]
Coordinates
chrLK032613:-:122639..123760
Molecular Weight (calculated)
20555.0 Da
IEP (calculated)
9.537
GRAVY (calculated)
0.137
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMMRSFSMA MLLVALVSSI SIVSSASSSP EAEFVKKTIS SHKIVIFSKS YCPYCRRAKS VFSELDQVPH VVELDEREDG WNVQSALGEI VGRRTVPQVF
101: INGKHIGGSD GKYSASSPSY TSIACWKALI AEVMFSNSES VDGWRRASLD TSEAALKITL LRRRECIILR VFLQKKNFII VFFL
101: INGKHIGGSD GKYSASSPSY TSIACWKALI AEVMFSNSES VDGWRRASLD TSEAALKITL LRRRECIILR VFLQKKNFII VFFL
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.