CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036458.1-P	Field mustard	plastid	94.8	98.2
CDY05731	Canola	plastid	95.38	94.83
AT2G20270.2	Thale cress	plastid	68.79	57.77
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	39.88	56.1
HORVU7Hr1G064020.2	Barley	extracellular	25.43	54.32
KRH32275	Soybean	plastid	52.02	54.22
CDY06875	Canola	plastid	53.18	52.57
KRH19662	Soybean	plastid	50.29	52.41
CDY35215	Canola	plastid	51.45	51.45
KRH55649	Soybean	plastid	48.55	51.22
VIT_07s0005g04860.t01	Wine grape	plastid	52.6	51.12
CDY50922	Canola	plastid	50.29	48.33
CDX92892	Canola	plastid	49.71	48.31
CDY44566	Canola	cytosol	30.64	47.75
CDY36849	Canola	cytosol	30.64	47.75
CDY68269	Canola	plastid	49.13	47.49
Zm00001d031856_P002	Maize	plastid	45.66	47.31
CDX97456	Canola	plastid	49.13	46.96
TraesCS7B01G185700.1	Wheat	plastid	45.66	46.47
Solyc06g083690.2.1	Tomato	plastid	49.13	46.45
TraesCS7D01G289300.1	Wheat	plastid	45.09	45.88
TraesCS7A01G293400.1	Wheat	plastid	45.09	45.88
OQU80669	Sorghum	mitochondrion, plastid	39.31	44.16
Zm00001d049886_P001	Maize	plastid	44.51	43.26
CDY16750	Canola	cytosol	27.17	40.52
CDX84377	Canola	cytosol	27.75	40.0
CDY00348	Canola	cytosol	27.75	40.0
CDY16749	Canola	cytosol	28.9	40.0
CDX87275	Canola	cytosol	26.59	39.66
CDX87276	Canola	cytosol	27.75	38.4
CDX92459	Canola	endoplasmic reticulum, golgi	25.43	33.85
CDY16539	Canola	endoplasmic reticulum	25.43	33.33
PGSC0003DMT400051717	Potato	plastid	49.13	32.32
Os08t0565800-01	Rice	cytosol	32.37	32.0
CDX81399	Canola	extracellular, plasma membrane	23.7	30.15
CDX99634	Canola	cytosol	27.17	30.13
CDY15928	Canola	cytosol	27.17	30.13
CDY18599	Canola	extracellular, vacuole	23.12	29.85
CDY45086	Canola	endoplasmic reticulum	27.17	25.54
HORVU7Hr1G064050.1	Barley	mitochondrion	24.86	25.15

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078GZX1	UniProt:A0A078GZX1	EnsemblPlants:CDY31980	ProteinID:CDY31980
ProteinID:CDY31980.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00050776001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF14	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI00018C711D	SEG:seg

Description

BnaA07g00150DBnaA07g00150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZX1]

Coordinates

chrLK032283:+:293268..294514

Molecular Weight (calculated)

18617.4 Da

IEP (calculated)

9.616

GRAVY (calculated)

-0.036

Length

173 amino acids

Sequence
(BLAST)

001: MAASANLGSL RSTTTSLFSN RPFSLSMLRS SLVLRTCLIK PTPLRLLVSW PPHHGSSVRA MSSSSSSLEE TVKTTVAENP VVVYSKSWCS YSSEVKSLFN
101: GLQVKPLVVE LDQLGAEGSQ LQTVLEKLTG QFTVPNVFIG GKHIGGCSDT LQLYNKGQLE PMLAEANAKT GRT

Best Arabidopsis Sequence Match ( AT2G20270.1 )
(BLAST)

001: MVAATVNLAN MTWTSLNSNP AISFSMLSGI RNLGMLPFRR CLKPTVIGIA SWPPLRCSSV KAMSSSSSSS GSTLEETVKT TVAENPVVVY SKTWCSYSSQ
101: VKSLFKSLQV EPLVVELDQL GSEGSQLQNV LEKITGQYTV PNVFIGGKHI GGCSDTLQLH NKGELEAILA EANGKNGQT

Arabidopsis Description

Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IUG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.