Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15928 | Canola | cytosol | 96.15 | 96.15 |
| CDY44566 | Canola | cytosol | 55.77 | 78.38 |
| CDY36849 | Canola | cytosol | 55.77 | 78.38 |
| PGSC0003DMT400049116 | Potato | cytosol | 48.72 | 70.37 |
| Solyc06g005260.2.1 | Tomato | extracellular | 48.08 | 69.44 |
| KRH07180 | Soybean | cytosol | 44.87 | 65.42 |
| VIT_14s0066g00960.t01 | Wine grape | cytosol | 47.44 | 64.91 |
| PGSC0003DMT400001269 | Potato | cytosol | 44.87 | 64.81 |
| GSMUA_Achr4P01420_001 | Banana | cytosol | 45.51 | 64.55 |
| GSMUA_Achr1P24480_001 | Banana | cytosol | 42.95 | 63.21 |
| Os04t0508300-01 | Rice | extracellular | 43.59 | 60.71 |
| EES05437 | Sorghum | cytosol | 43.59 | 59.13 |
| CDY16750 | Canola | cytosol | 42.31 | 56.9 |
| TraesCS2A01G363600.1 | Wheat | plastid | 46.79 | 56.59 |
| CDX87275 | Canola | cytosol | 41.03 | 55.17 |
| TraesCS2D01G361400.1 | Wheat | plastid | 45.51 | 55.04 |
| TraesCS2B01G381600.1 | Wheat | plastid | 46.15 | 54.96 |
| Os02t0618100-01 | Rice | plasma membrane | 43.59 | 53.12 |
| CDY00348 | Canola | cytosol | 40.38 | 52.5 |
| CDX84377 | Canola | cytosol | 40.38 | 52.5 |
| CDY16749 | Canola | cytosol | 41.67 | 52.0 |
| Zm00001d003081_P003 | Maize | mitochondrion | 43.59 | 51.91 |
| EES11094 | Sorghum | plastid | 42.31 | 51.56 |
| Zm00001d017240_P001 | Maize | cytosol, extracellular | 43.59 | 51.52 |
| CDX87276 | Canola | cytosol | 40.38 | 50.4 |
| AT5G40370.2 | Thale cress | cytosol | 41.67 | 47.79 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 29.49 | 35.38 |
| CDY16539 | Canola | endoplasmic reticulum | 28.85 | 34.09 |
| CDX81399 | Canola | extracellular, plasma membrane | 26.28 | 30.15 |
| CDY18599 | Canola | extracellular, vacuole | 25.64 | 29.85 |
| CDY06875 | Canola | plastid | 32.05 | 28.57 |
| CDY35215 | Canola | plastid | 30.77 | 27.75 |
| CDY31980 | Canola | plastid | 30.13 | 27.17 |
| CDX97456 | Canola | plastid | 30.13 | 25.97 |
| CDY05731 | Canola | plastid | 28.85 | 25.86 |
| CDY68269 | Canola | plastid | 29.49 | 25.7 |
| CDX92892 | Canola | plastid | 28.21 | 24.72 |
| CDY45086 | Canola | endoplasmic reticulum | 28.85 | 24.46 |
| CDY50922 | Canola | plastid | 28.21 | 24.44 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078EFR8 | EnsemblPlants:CDX99634 | ProteinID:CDX99634 | ProteinID:CDX99634.1 |
| InterPro:GLR_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00108143001 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir |
| InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 | ScanProsite:PS00195 | PFscan:PS51354 |
| PANTHER:PTHR10168 | PANTHER:PTHR10168:SF122 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EEBC53 |
Description
BnaC04g33910D
Coordinates
chrLK031912:+:514727..516223
Molecular Weight (calculated)
17153.7 Da
IEP (calculated)
10.485
GRAVY (calculated)
-0.528
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMKKAKEIV SSNAVVVFSK SYCPYCVKVK DLLKKLGAKF IAVELDKESD GAQVQSALAE WTGQRTVPNV FIGEKHIGGC DSVTNLHRGG KLVPLLTVSK
101: PSSKIRSSIT KARQGDNMPT EVEGPSRARK TSHTELTWSK QKQKGGRNIK YDFKDT
101: PSSKIRSSIT KARQGDNMPT EVEGPSRARK TSHTELTWSK QKQKGGRNIK YDFKDT
001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A
101: AIAGKTATTS A
Arabidopsis Description
Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.