Factsheet for Zm00001d003081_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11094	Sorghum	plastid	92.37	94.53
Os04t0508300-01	Rice	extracellular	72.52	84.82
TraesCS2B01G381600.1	Wheat	plastid	79.39	79.39
TraesCS2D01G361400.1	Wheat	plastid	77.86	79.07
TraesCS2A01G363600.1	Wheat	plastid	76.34	77.52
GSMUA_Achr1P24480_001	Banana	cytosol	59.54	73.58
KRH07180	Soybean	cytosol	59.54	72.9
Solyc06g005260.2.1	Tomato	extracellular	58.02	70.37
PGSC0003DMT400049116	Potato	cytosol	58.02	70.37
GSMUA_Achr4P01420_001	Banana	cytosol	56.49	67.27
VIT_14s0066g00960.t01	Wine grape	cytosol	58.02	66.67
PGSC0003DMT400001269	Potato	cytosol	54.96	66.67
Bra025584.1-P	Field mustard	cytosol	55.73	65.77
CDY44566	Canola	cytosol	55.73	65.77
CDY36849	Canola	cytosol	55.73	65.77
Zm00001d017240_P001	Maize	cytosol, extracellular	64.12	63.64
AT5G40370.2	Thale cress	cytosol	50.38	48.53
CDY15928	Canola	cytosol	51.91	43.59
CDX99634	Canola	cytosol	51.91	43.59
Bra030333.1-P	Field mustard	cytosol	51.91	43.59
Zm00001d046900_P003	Maize	mitochondrion	35.11	34.07
Zm00001d031856_P002	Maize	plastid	34.35	26.95
Zm00001d017417_P001	Maize	cytosol	25.95	26.15
Zm00001d049886_P001	Maize	plastid	34.35	25.28

Protein Annotations

EntrezGene:100283339	MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:B6THA1	EMBL:EU964366	InterPro:GLR_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
ProteinID:ONM16000.1	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI000182D737	EnsemblPlantsGene:Zm00001d003081
EnsemblPlants:Zm00001d003081_P003	EnsemblPlants:Zm00001d003081_T003	SEG:seg	:	:	:

Description

glutaredoxin homolog1 glutaredoxin homolog1

Coordinates

chr2:-:31389885..31393179

Molecular Weight (calculated)

13690.4 Da

IEP (calculated)

8.047

GRAVY (calculated)

-0.059

Length

131 amino acids

Sequence
(BLAST)

001: MGITSSTSSP TSSPESRAMA LAKAKEIVAS APLVVFSKTS CPFCVRVKQL FEKLGASYKA IELDKESDGA ELQNALKEWT GQRTVPNVFI NGKHIGGCDD
101: TMALNNDGKL VPLLTEAGAI AGSASKTTIT A

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.