Factsheet for Bra030333.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 3
mitochondrion 1
cytosol 3
plastid 1
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15928	Canola	cytosol	97.44	97.44
Bra025584.1-P	Field mustard	cytosol	55.13	77.48
PGSC0003DMT400049116	Potato	cytosol	48.72	70.37
Solyc06g005260.2.1	Tomato	extracellular	48.08	69.44
KRH07180	Soybean	cytosol	44.87	65.42
VIT_14s0066g00960.t01	Wine grape	cytosol	47.44	64.91
PGSC0003DMT400001269	Potato	cytosol	44.87	64.81
GSMUA_Achr4P01420_001	Banana	cytosol	45.51	64.55
GSMUA_Achr1P24480_001	Banana	cytosol	42.95	63.21
Os04t0508300-01	Rice	extracellular	43.59	60.71
EES05437	Sorghum	cytosol	43.59	59.13
Bra035868.1-P	Field mustard	cytosol	42.31	56.9
TraesCS2A01G363600.1	Wheat	plastid	46.79	56.59
TraesCS2D01G361400.1	Wheat	plastid	45.51	55.04
TraesCS2B01G381600.1	Wheat	plastid	46.15	54.96
Os02t0618100-01	Rice	plasma membrane	43.59	53.12
Bra038602.1-P	Field mustard	cytosol	40.38	52.5
Bra035867.1-P	Field mustard	cytosol	41.67	52.0
Zm00001d003081_P003	Maize	mitochondrion	43.59	51.91
EES11094	Sorghum	plastid	42.31	51.56
Zm00001d017240_P001	Maize	cytosol, extracellular	43.59	51.52
AT5G40370.2	Thale cress	cytosol	41.67	47.79
Bra020106.1-P	Field mustard	endoplasmic reticulum	29.49	34.59
Bra002306.1-P	Field mustard	golgi	28.85	34.09
Bra037174.1-P	Field mustard	extracellular, vacuole	25.64	29.85
Bra011056.1-P	Field mustard	plastid	30.77	27.75
Bra010351.1-P	Field mustard	plastid	30.13	26.26
Bra036458.1-P	Field mustard	plastid	25.64	23.95
Bra024183.1-P	Field mustard	plastid	23.72	22.02

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra030333	EnsemblPlants:Bra030333.1	EnsemblPlants:Bra030333.1-P	InterPro:GLR_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M4ENG3	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI0002543A63	SEG:seg

Description

AT5G40370 (E=2e-035) | glutaredoxin, putative

Coordinates

chrA04:-:9042901..9044188

Molecular Weight (calculated)

17161.8 Da

IEP (calculated)

10.484

GRAVY (calculated)

-0.534

Length

156 amino acids

Sequence
(BLAST)

001: MAMKKAKEIV SSNVVVVFSK SYCPYCVKVK DLLKKLGAKF IAVELDKESD GAQVQSALAE WTGQRTVPNV FIGEKHIGGC DSVTNLHRGG KLVPLLTVSK
101: PSSKIRSSIT KARQGDNMPT EVEGPSRARK TSHTELTRSK QKHKGGRDIK YDFKDT

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.