Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002306.1-P | Field mustard | golgi | 84.21 | 84.85 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 84.21 | 82.96 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 24.06 | 72.73 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 42.86 | 68.67 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 66.92 | 65.44 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 37.59 | 64.94 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 30.08 | 63.49 |
| CDY45086 | Canola | endoplasmic reticulum | 87.22 | 63.04 |
| KRH37371 | Soybean | endoplasmic reticulum | 62.41 | 62.41 |
| KRH12368 | Soybean | endoplasmic reticulum | 62.41 | 61.94 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 55.64 | 58.73 |
| Solyc11g069860.1.1 | Tomato | plastid | 62.41 | 58.04 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 61.65 | 57.34 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 55.64 | 54.81 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 55.64 | 54.81 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 55.64 | 54.81 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 56.39 | 54.74 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 54.14 | 54.55 |
| EER88767 | Sorghum | mitochondrion | 54.89 | 54.07 |
| Zm00001d046900_P003 | Maize | mitochondrion | 54.14 | 53.33 |
| Bra037174.1-P | Field mustard | extracellular, vacuole | 51.88 | 51.49 |
| Bra025584.1-P | Field mustard | cytosol | 34.59 | 41.44 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 40.6 | 39.42 |
| Bra038602.1-P | Field mustard | cytosol | 35.34 | 39.17 |
| Bra035868.1-P | Field mustard | cytosol | 33.83 | 38.79 |
| Bra035867.1-P | Field mustard | cytosol | 35.34 | 37.6 |
| Bra011056.1-P | Field mustard | plastid | 40.6 | 31.21 |
| Bra030333.1-P | Field mustard | cytosol | 34.59 | 29.49 |
| Bra010351.1-P | Field mustard | plastid | 37.59 | 27.93 |
| Bra036458.1-P | Field mustard | plastid | 33.08 | 26.35 |
| Bra024183.1-P | Field mustard | plastid | 31.58 | 25.0 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra020106 | EnsemblPlants:Bra020106.1 | EnsemblPlants:Bra020106.1-P | InterPro:GLR_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 |
| GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 |
| UniProt:M4DUB3 | PFAM:PF00462 | PRINTS:PR00160 | ScanProsite:PS00195 | PFscan:PS51354 | PANTHER:PTHR10168 |
| PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI00003502A9 |
| SEG:seg | : | : | : | : | : |
Description
AT5G20500 (E=2e-051) | glutaredoxin, putative
Coordinates
chrA02:+:5068680..5069684
Molecular Weight (calculated)
14518.5 Da
IEP (calculated)
6.512
GRAVY (calculated)
0.032
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMMRSFSMA MLLVALVSSI SIVSSASSSP EAEFVKKTIS SHKIVIFSKS YCPYCRRAKS VFSELDQVPH VVELDEREDG WNVQSALGEI VGRRTVPQVF
101: INGKHIGGSD DTVEAHESGE LAKLLGLSTK AEL
101: INGKHIGGSD DTVEAHESGE LAKLLGLSTK AEL
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.