Factsheet for GSMUA_Achr7P04990_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, golgi, plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

plastid 3
cytosol 3
extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0659500-01	Rice	cytosol, plasma membrane	51.59	84.42
HORVU7Hr1G110720.1	Barley	cytosol	53.97	81.93
HORVU7Hr1G009480.1	Barley	cytosol	26.98	77.27
HORVU3Hr1G028600.1	Barley	cytosol	36.51	73.02
GSMUA_Achr1P10400_001	Banana	plastid	71.43	68.18
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	73.02	68.15
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	73.02	68.15
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	73.81	67.88
TraesCS7B01G404000.1	Wheat	mitochondrion, plastid	72.22	67.41
Zm00001d046900_P003	Maize	mitochondrion	70.63	65.93
EER88767	Sorghum	mitochondrion	70.63	65.93
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	65.87	61.03
KRH37371	Soybean	endoplasmic reticulum	62.7	59.4
AT5G20500.1	Thale cress	endoplasmic reticulum	61.11	57.04
CDX92459	Canola	endoplasmic reticulum, golgi	57.94	56.15
Bra002306.1-P	Field mustard	golgi	58.73	56.06
KRH12368	Soybean	endoplasmic reticulum	59.52	55.97
Solyc11g069860.1.1	Tomato	plastid	63.49	55.94
Bra020106.1-P	Field mustard	endoplasmic reticulum	58.73	55.64
CDY16539	Canola	endoplasmic reticulum	57.94	55.3
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	62.7	55.24
GSMUA_Achr1P23530_001	Banana	extracellular	54.76	50.37
GSMUA_Achr1P24480_001	Banana	cytosol	35.71	42.45
GSMUA_Achr4P01420_001	Banana	cytosol	34.92	40.0
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	36.51	37.4
CDY45086	Canola	endoplasmic reticulum	53.17	36.41
GSMUA_Achr3P18650_001	Banana	extracellular	26.19	34.02
GSMUA_Achr11P...	Banana	mitochondrion	45.24	33.73

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G04990_001
EnsemblPlants:GSMUA_Achr7P04990_001	EnsemblPlants:GSMUA_Achr7T04990_001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M0TET9	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI000294AC8C
SEG:seg	:	:	:	:	:

Description

Glutaredoxin-C8 [Source:GMGC_GENE;Acc:GSMUA_Achr7G04990_001]

Coordinates

chr7:+:3742428..3744654

Molecular Weight (calculated)

13777.6 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.060

Length

126 amino acids

Sequence
(BLAST)

001: MTAVAVLAVA TSLFGLSDAS AAKKVAFVKK TVSSHDIVIF SKSYCPYCRK AKAVFKELKK EPYVVELDQR EDGYEIQDAL SEMVGRRTVP QVFIQGKHLG
101: GSDDTVEAYE SGKLLTLIGI DSKDDL

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.