Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020106.1-P | Field mustard | endoplasmic reticulum | 82.96 | 84.21 |
| Bra002306.1-P | Field mustard | golgi | 82.22 | 84.09 |
| CDY16539 | Canola | endoplasmic reticulum | 82.22 | 84.09 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 80.0 | 83.08 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 25.93 | 79.55 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 44.44 | 72.29 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 32.59 | 69.84 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 39.26 | 68.83 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 65.19 | 64.71 |
| KRH37371 | Soybean | endoplasmic reticulum | 61.48 | 62.41 |
| KRH12368 | Soybean | endoplasmic reticulum | 60.74 | 61.19 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 57.04 | 61.11 |
| Solyc11g069860.1.1 | Tomato | plastid | 62.96 | 59.44 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 62.22 | 58.74 |
| EER88767 | Sorghum | mitochondrion | 57.78 | 57.78 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 57.04 | 57.04 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 57.04 | 57.04 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 57.04 | 57.04 |
| Zm00001d046900_P003 | Maize | mitochondrion | 57.04 | 57.04 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 54.81 | 56.06 |
| CDY45086 | Canola | endoplasmic reticulum | 76.3 | 55.98 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 56.3 | 55.47 |
| AT1G77370.2 | Thale cress | extracellular | 50.37 | 43.59 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 39.26 | 38.69 |
| AT5G63030.1 | Thale cress | cytosol | 31.11 | 33.6 |
| AT5G40370.2 | Thale cress | cytosol | 30.37 | 30.15 |
| AT4G28730.1 | Thale cress | plastid | 33.33 | 25.86 |
| AT2G20270.2 | Thale cress | plastid | 32.59 | 21.36 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:832172 | ProteinID:AED92853.1 | EMBL:AF296833 | EMBL:AJ271472 |
| ArrayExpress:AT5G20500 | EnsemblPlantsGene:AT5G20500 | RefSeq:AT5G20500 | TAIR:AT5G20500 | RefSeq:AT5G20500-TAIR-G | EnsemblPlants:AT5G20500.1 |
| TAIR:AT5G20500.1 | EMBL:AY084705 | EMBL:BT002005 | EMBL:BT002008 | EMBL:BT025498 | InterPro:GLR_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 |
| GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | RefSeq:NP_197550.1 |
| PFAM:PF00462 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00160 |
| ScanProsite:PS00195 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 | UniProt:Q8LFQ6 | SUPFAM:SSF52833 |
| SignalP:SignalP-noTM | TIGRFAMs:TIGR02180 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI00000AC27D | : |
Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
Coordinates
chr5:+:6938417..6939848
Molecular Weight (calculated)
14827.9 Da
IEP (calculated)
5.762
GRAVY (calculated)
0.076
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.