Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035867.1-P | Field mustard | cytosol | 94.4 | 94.4 |
| CDY16749 | Canola | cytosol | 93.6 | 93.6 |
| Bra038602.1-P | Field mustard | cytosol | 89.6 | 93.33 |
| CDY00348 | Canola | cytosol | 89.6 | 93.33 |
| CDX84377 | Canola | cytosol | 88.8 | 92.5 |
| CDX87276 | Canola | cytosol | 92.0 | 92.0 |
| VIT_17s0000g08670.t01 | Wine grape | cytosol | 70.4 | 70.97 |
| Solyc03g112770.2.1 | Tomato | plastid | 65.6 | 65.6 |
| PGSC0003DMT400046764 | Potato | plastid | 64.8 | 64.8 |
| GSMUA_Achr3P18650_001 | Banana | extracellular | 43.2 | 55.67 |
| AT5G40370.2 | Thale cress | cytosol | 52.0 | 47.79 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 33.6 | 31.11 |
| AT4G28730.1 | Thale cress | plastid | 36.8 | 26.44 |
| AT1G77370.2 | Thale cress | extracellular | 32.0 | 25.64 |
| AT2G20270.2 | Thale cress | plastid | 37.6 | 22.82 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:836423 | ProteinID:AED97688.1 | ArrayExpress:AT5G63030 | EnsemblPlantsGene:AT5G63030 |
| RefSeq:AT5G63030 | TAIR:AT5G63030 | RefSeq:AT5G63030-TAIR-G | EnsemblPlants:AT5G63030.1 | TAIR:AT5G63030.1 | EMBL:AY081257 |
| EMBL:AY088825 | EMBL:AY114565 | Unigene:At.29018 | ProteinID:BAB08846.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 |
| GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 |
| RefSeq:NP_568962.1 | PFAM:PF00462 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF73 | UniProt:Q8L8T2 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI00000A8245 | : | : | : |
Description
GRXC1Glutaredoxin-C1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8T2]
Coordinates
chr5:+:25286177..25287694
Molecular Weight (calculated)
13611.4 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.132
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMFSGNRM SKEEMEVVVN KAKEIVSAYP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ TTVPNVFIKG NHIGGCDRVM
101: ETNKQGKLVP LLTEAGAIAD NSSQL
101: ETNKQGKLVP LLTEAGAIAD NSSQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.