Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 2
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY00348 | Canola | cytosol | 100.0 | 100.0 |
CDX84377 | Canola | cytosol | 99.17 | 99.17 |
Bra035867.1-P | Field mustard | cytosol | 95.83 | 92.0 |
AT5G63030.1 | Thale cress | cytosol | 93.33 | 89.6 |
Bra035868.1-P | Field mustard | cytosol | 75.0 | 77.59 |
VIT_17s0000g08670.t01 | Wine grape | cytosol | 70.83 | 68.55 |
PGSC0003DMT400046764 | Potato | plastid | 67.5 | 64.8 |
Solyc03g112770.2.1 | Tomato | plastid | 67.5 | 64.8 |
Bra025584.1-P | Field mustard | cytosol | 56.67 | 61.26 |
GSMUA_Achr3P18650_001 | Banana | extracellular | 45.0 | 55.67 |
Bra030333.1-P | Field mustard | cytosol | 52.5 | 40.38 |
Bra002306.1-P | Field mustard | golgi | 40.0 | 36.36 |
Bra020106.1-P | Field mustard | endoplasmic reticulum | 39.17 | 35.34 |
Bra037174.1-P | Field mustard | extracellular, vacuole | 35.83 | 32.09 |
Bra011056.1-P | Field mustard | plastid | 40.0 | 27.75 |
Bra010351.1-P | Field mustard | plastid | 38.33 | 25.7 |
Bra036458.1-P | Field mustard | plastid | 34.17 | 24.55 |
Bra024183.1-P | Field mustard | plastid | 34.17 | 24.4 |
Protein Annotations
MapMan:18.8.2 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra038602 | EnsemblPlants:Bra038602.1 | EnsemblPlants:Bra038602.1-P | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 |
GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | UniProt:M4FBY6 |
PFAM:PF00462 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF73 | SUPFAM:SSF52833 |
TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI00003502A6 | : | : | : |
Description
AT5G63030 (E=3e-061) | glutaredoxin, putative
Coordinates
chrA06:-:14094981..14095859
Molecular Weight (calculated)
13065.8 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.147
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMFSGNRL NKEEMEVVVN KAKEIVSAHP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ STVPNVFIKG KHIGGCDRVM
101: ESNKQGKLVP LLTEAGAISN
101: ESNKQGKLVP LLTEAGAISN
001: MGSMFSGNRM SKEEMEVVVN KAKEIVSAYP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ TTVPNVFIKG NHIGGCDRVM
101: ETNKQGKLVP LLTEAGAIAD NSSQL
101: ETNKQGKLVP LLTEAGAIAD NSSQL
Arabidopsis Description
GRXC1Glutaredoxin-C1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8T2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.