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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 2
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00348 Canola cytosol 100.0 100.0
CDX84377 Canola cytosol 99.17 99.17
Bra035867.1-P Field mustard cytosol 95.83 92.0
AT5G63030.1 Thale cress cytosol 93.33 89.6
Bra035868.1-P Field mustard cytosol 75.0 77.59
VIT_17s0000g08670.t01 Wine grape cytosol 70.83 68.55
PGSC0003DMT400046764 Potato plastid 67.5 64.8
Solyc03g112770.2.1 Tomato plastid 67.5 64.8
Bra025584.1-P Field mustard cytosol 56.67 61.26
GSMUA_Achr3P18650_001 Banana extracellular 45.0 55.67
Bra030333.1-P Field mustard cytosol 52.5 40.38
Bra002306.1-P Field mustard golgi 40.0 36.36
Bra020106.1-P Field mustard endoplasmic reticulum 39.17 35.34
Bra037174.1-P Field mustard extracellular, vacuole 35.83 32.09
Bra011056.1-P Field mustard plastid 40.0 27.75
Bra010351.1-P Field mustard plastid 38.33 25.7
Bra036458.1-P Field mustard plastid 34.17 24.55
Bra024183.1-P Field mustard plastid 34.17 24.4
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EnsemblPlantsGene:Bra038602EnsemblPlants:Bra038602.1EnsemblPlants:Bra038602.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152
GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454
GO:GO:0055114InterPro:GlutaredoxinInterPro:Glutaredoxin_euk/virInterPro:Glutaredoxin_subgrInterPro:IPR002109UniProt:M4FBY6
PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF73SUPFAM:SSF52833
TIGRFAMs:TIGR02180InterPro:Thioredoxin-like_sfUniParc:UPI00003502A6:::
Description
AT5G63030 (E=3e-061) | glutaredoxin, putative
Coordinates
chrA06:-:14094981..14095859
Molecular Weight (calculated)
13065.8 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.147
Length
120 amino acids
Sequence
(BLAST)
001: MGSMFSGNRL NKEEMEVVVN KAKEIVSAHP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ STVPNVFIKG KHIGGCDRVM
101: ESNKQGKLVP LLTEAGAISN
Best Arabidopsis Sequence Match ( AT5G63030.1 )
(BLAST)
001: MGSMFSGNRM SKEEMEVVVN KAKEIVSAYP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ TTVPNVFIKG NHIGGCDRVM
101: ETNKQGKLVP LLTEAGAIAD NSSQL
Arabidopsis Description
GRXC1Glutaredoxin-C1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8T2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.