Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035867.1-P | Field mustard | cytosol | 72.58 | 72.0 |
| CDY16749 | Canola | cytosol | 72.58 | 72.0 |
| Bra038602.1-P | Field mustard | cytosol | 68.55 | 70.83 |
| CDY00348 | Canola | cytosol | 68.55 | 70.83 |
| AT5G63030.1 | Thale cress | cytosol | 70.97 | 70.4 |
| CDX84377 | Canola | cytosol | 67.74 | 70.0 |
| CDX87276 | Canola | cytosol | 70.16 | 69.6 |
| Bra035868.1-P | Field mustard | cytosol | 63.71 | 68.1 |
| CDX87275 | Canola | cytosol | 63.71 | 68.1 |
| CDY16750 | Canola | cytosol | 63.71 | 68.1 |
| PGSC0003DMT400046764 | Potato | plastid | 68.55 | 68.0 |
| Solyc03g112770.2.1 | Tomato | plastid | 68.55 | 68.0 |
| VIT_14s0066g00960.t01 | Wine grape | cytosol | 59.68 | 64.91 |
| GSMUA_Achr3P18650_001 | Banana | extracellular | 44.35 | 56.7 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 37.9 | 34.56 |
| VIT_04s0023g02800.t01 | Wine grape | extracellular, vacuole | 29.84 | 28.91 |
| VIT_07s0005g04860.t01 | Wine grape | plastid | 37.9 | 26.4 |
Protein Annotations
| EntrezGene:100260385 | wikigene:100260385 | MapMan:18.8.2 | Gene3D:3.40.30.10 | ProteinID:CCB42970 | ProteinID:CCB42970.1 |
| UniProt:F6GSM3 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir |
| InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | EntrezGene:LOC100260385 | wikigene:LOC100260385 | PFAM:PF00462 | PRINTS:PR00160 |
| ScanProsite:PS00194 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF73 | SUPFAM:SSF52833 | TIGR:TC60956 |
| TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | UniParc:UPI00015C8D27 | ArrayExpress:VIT_17s0000g08670 | EnsemblPlantsGene:VIT_17s0000g08670 |
| EnsemblPlants:VIT_17s0000g08670.t01 | RefSeq:XP_002282196 | RefSeq:XP_002282196.1 | : | : | : |
Description
No Description!
Coordinates
chr17:-:9941630..9942593
Molecular Weight (calculated)
13365.2 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.233
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVLGKGKS KEEVEMALAK AKEIVSSTPV VVFSKTYCGY CKRVKQLLSQ LKATHKTIEL DQESDGAEIQ SALREWTGQS TVPNVFIGGK HMGGCDSVME
101: KHQEGKLVPL LKEAGAIAEV STQL
101: KHQEGKLVPL LKEAGAIAEV STQL
001: MGSMFSGNRM SKEEMEVVVN KAKEIVSAYP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ TTVPNVFIKG NHIGGCDRVM
101: ETNKQGKLVP LLTEAGAIAD NSSQL
101: ETNKQGKLVP LLTEAGAIAD NSSQL
Arabidopsis Description
GRXC1Glutaredoxin-C1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8T2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.