Factsheet for VIT_04s0023g02800.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28731	Soybean	endoplasmic reticulum, extracellular	64.06	63.57
KRH76731	Soybean	extracellular, golgi	64.06	63.57
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	57.81	58.73
TraesCS6A01G239400.1	Wheat	endoplasmic reticulum, extracellular	57.81	58.73
CDX81399	Canola	extracellular, plasma membrane	60.94	57.35
Bra037174.1-P	Field mustard	extracellular, vacuole	59.38	56.72
CDY18599	Canola	extracellular, vacuole	59.38	56.72
EES07538	Sorghum	endoplasmic reticulum, extracellular	54.69	55.56
Os02t0646400-01	Rice	extracellular	56.25	54.96
AT1G77370.2	Thale cress	extracellular	62.5	51.28
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	52.34	49.26
Zm00001d017417_P001	Maize	cytosol	47.66	46.92
GSMUA_Achr11P...	Banana	mitochondrion	60.16	45.56
HORVU6Hr1G061200.1	Barley	cytosol, plastid	55.47	41.52
TraesCS6D01G221800.1	Wheat	cytosol	57.81	39.15
Solyc02g084660.2.1	Tomato	mitochondrion	64.06	36.44
PGSC0003DMT400009308	Potato	mitochondrion	64.06	36.44
VIT_14s0066g00960.t01	Wine grape	cytosol	30.47	34.21
VIT_17s0000g08670.t01	Wine grape	cytosol	28.91	29.84
VIT_07s0005g04860.t01	Wine grape	plastid	32.81	23.6

Protein Annotations

EntrezGene:100241967	wikigene:100241967	MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:CBI17423	ProteinID:CBI17423.3
UniProt:D7SP44	EMBL:FN594959	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	EntrezGene:LOC100241967	wikigene:LOC100241967	PFAM:PF00462
PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGRFAMs:TIGR02180	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CB791	ArrayExpress:VIT_04s0023g02800
EnsemblPlantsGene:VIT_04s0023g02800	EnsemblPlants:VIT_04s0023g02800.t01	unigene:Vvi.19354	RefSeq:XP_002273515	RefSeq:XP_002273515.1	SEG:seg

Description

No Description!

Coordinates

chr4:-:19373391..19378087

Molecular Weight (calculated)

14010.0 Da

IEP (calculated)

8.741

GRAVY (calculated)

0.062

Length

128 amino acids

Sequence
(BLAST)

001: MKARHHSVVL VILLGVLVAN APGQTLASNS VPAFVQNTIY ANKIAIFSKS YCPYCLRAKR IFSELHEEPF VVELDHRDDG TQIQNVLLDL VGRSTVPQIF
101: VNGKHIGGSD DLRNAVLSGQ LQKQLGTS

Best Arabidopsis Sequence Match ( AT1G77370.1 )
(BLAST)

001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.