Factsheet for TraesCS6A01G239400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	96.03	96.03
EES07538	Sorghum	endoplasmic reticulum, extracellular	80.16	80.16
Os02t0646400-01	Rice	extracellular	79.37	76.34
HORVU6Hr1G061200.1	Barley	cytosol, plastid	92.86	68.42
TraesCS6D01G221800.1	Wheat	cytosol	95.24	63.49
KRH28731	Soybean	endoplasmic reticulum, extracellular	59.52	58.14
VIT_04s0023g02800.t01	Wine grape	extracellular, vacuole	58.73	57.81
KRH76731	Soybean	extracellular, golgi	58.73	57.36
Bra037174.1-P	Field mustard	extracellular, vacuole	58.73	55.22
CDY18599	Canola	extracellular, vacuole	58.73	55.22
CDX81399	Canola	extracellular, plasma membrane	59.52	55.15
Zm00001d017417_P001	Maize	cytosol	55.56	53.85
AT1G77370.2	Thale cress	extracellular	61.11	49.36
GSMUA_Achr11P...	Banana	mitochondrion	61.9	46.15
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	48.41	45.19
TraesCS2A01G363600.1	Wheat	plastid	33.33	32.56
PGSC0003DMT400009308	Potato	mitochondrion	57.14	32.0
Solyc02g084660.2.1	Tomato	mitochondrion	57.14	32.0
TraesCS7A01G293400.1	Wheat	plastid	32.54	24.12

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:Glutaredoxin
InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR02180
InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS6A01G239400	EnsemblPlants:TraesCS6A01G239400.1	TIGR:cd03419	SEG:seg	:

Description

No Description!

Coordinates

chr6A:+:449638491..449640416

Molecular Weight (calculated)

13875.6 Da

IEP (calculated)

8.214

GRAVY (calculated)

-0.081

Length

126 amino acids

Sequence
(BLAST)

001: MSLIRIAFSL VLLLAAAESA AATRSPSAFV QNAIYSNRIT IFSKSYCPYC MRTKRIFKDL NENPYVVELD LREDGRDIQG VLLDLVGRNT VPQVFVNGHH
101: VGGSDDTKTA LSDGQLQKLL GQSQSQ

Best Arabidopsis Sequence Match ( AT1G77370.1 )
(BLAST)

001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.