Factsheet for TraesCS7A01G493400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	100.0	100.0
HORVU7Hr1G110720.1	Barley	cytosol	60.74	98.8
TraesCS7B01G404000.1	Wheat	mitochondrion, plastid	98.52	98.52
HORVU7Hr1G009480.1	Barley	cytosol	31.85	97.73
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	98.52	97.08
Os06t0659500-01	Rice	cytosol, plasma membrane	51.11	89.61
HORVU3Hr1G028600.1	Barley	cytosol	40.74	87.3
EER88767	Sorghum	mitochondrion	85.19	85.19
Zm00001d046900_P003	Maize	mitochondrion	82.96	82.96
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.15	73.02
GSMUA_Achr1P10400_001	Banana	plastid	62.22	63.64
CDX92459	Canola	endoplasmic reticulum, golgi	57.78	60.0
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	60.0	59.56
KRH37371	Soybean	endoplasmic reticulum	57.78	58.65
Bra002306.1-P	Field mustard	golgi	57.04	58.33
CDY16539	Canola	endoplasmic reticulum	56.3	57.58
AT5G20500.1	Thale cress	endoplasmic reticulum	57.04	57.04
KRH12368	Soybean	endoplasmic reticulum	56.3	56.72
Bra020106.1-P	Field mustard	endoplasmic reticulum	54.81	55.64
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	56.3	53.15
Solyc11g069860.1.1	Tomato	plastid	54.81	51.75
TraesCS6A01G239400.1	Wheat	endoplasmic reticulum, extracellular	45.19	48.41
GSMUA_Achr1P23530_001	Banana	extracellular	46.67	45.99
TraesCS2A01G363600.1	Wheat	plastid	34.81	36.43
CDY45086	Canola	endoplasmic reticulum	48.15	35.33
TraesCS7A01G293400.1	Wheat	plastid	39.26	31.18

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0005794
GO:GO:0008150	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160
ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	TIGRFAMs:TIGR02180
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS7A01G493400	EnsemblPlants:TraesCS7A01G493400.1	TIGR:cd03419	SEG:seg

Description

No Description!

Coordinates

chr7A:-:681992451..681996570

Molecular Weight (calculated)

14597.4 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.058

Length

135 amino acids

Sequence
(BLAST)

001: MASTTFRRFG VAAAAAAFIA LAAFGSASAS KTAFVKSTVK AHDVVIFSKS YCPYCKRAKA VFKELELKKD PYVVELDQRE DGGEIQDALS DMVGRRTVPQ
101: VFIRGKHLGG SDDTVDAYES GELAKLLNIS VKDDL

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.