Factsheet for GSMUA_Achr1P10400_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0659500-01	Rice	cytosol, plasma membrane	44.7	76.62
HORVU7Hr1G009480.1	Barley	cytosol	25.0	75.0
HORVU7Hr1G110720.1	Barley	cytosol	46.97	74.7
HORVU3Hr1G028600.1	Barley	cytosol	34.09	71.43
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.18	71.43
EER88767	Sorghum	mitochondrion	65.91	64.44
Zm00001d046900_P003	Maize	mitochondrion	64.39	62.96
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	63.64	62.22
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	63.64	62.22
TraesCS7B01G404000.1	Wheat	mitochondrion, plastid	62.88	61.48
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	63.64	61.31
KRH37371	Soybean	endoplasmic reticulum	56.06	55.64
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	56.82	55.15
AT5G20500.1	Thale cress	endoplasmic reticulum	56.06	54.81
Bra002306.1-P	Field mustard	golgi	54.55	54.55
Bra020106.1-P	Field mustard	endoplasmic reticulum	54.55	54.14
CDX92459	Canola	endoplasmic reticulum, golgi	53.03	53.85
KRH12368	Soybean	endoplasmic reticulum	54.55	53.73
Solyc11g069860.1.1	Tomato	plastid	57.58	53.15
CDY16539	Canola	endoplasmic reticulum	53.03	53.03
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	56.06	51.75
GSMUA_Achr1P23530_001	Banana	extracellular	46.97	45.26
GSMUA_Achr1P24480_001	Banana	cytosol	33.33	41.51
GSMUA_Achr4P01420_001	Banana	cytosol	34.09	40.91
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	36.36	39.02
CDY45086	Canola	endoplasmic reticulum	48.48	34.78
GSMUA_Achr11P...	Banana	mitochondrion	43.94	34.32
GSMUA_Achr3P18650_001	Banana	extracellular	24.24	32.99

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G10400_001
EnsemblPlants:GSMUA_Achr1P10400_001	EnsemblPlants:GSMUA_Achr1T10400_001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M0RYP9	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI00029511B7	:

Description

Putative uncharacterized protein Sb10g026250 [Source:GMGC_GENE;Acc:GSMUA_Achr1G10400_001]

Coordinates

chr1:-:7850374..7852483

Molecular Weight (calculated)

14386.2 Da

IEP (calculated)

6.764

GRAVY (calculated)

-0.160

Length

132 amino acids

Sequence
(BLAST)

001: MASAAAGGVS VWHQRPCLRW RTPVSSASNK VAFVKKTVSS HDIVIFSKSY CPYCMTAKAV FQELKKEPCV LELDEIEDGS EIQDALSDIV GRRTVPQVFV
101: RGKHLGGSDD TVEAYESGRL LTLLGIGSKD DP

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.