Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 41.61 | 74.03 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 23.36 | 72.73 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 43.07 | 71.08 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 30.66 | 66.67 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 50.37 | 54.76 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 46.72 | 47.06 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 45.26 | 46.97 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 46.72 | 46.72 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 45.99 | 46.67 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 45.99 | 46.67 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 45.26 | 45.93 |
| EER88767 | Sorghum | mitochondrion | 45.26 | 45.93 |
| KRH37371 | Soybean | endoplasmic reticulum | 44.53 | 45.86 |
| KRH12368 | Soybean | endoplasmic reticulum | 43.8 | 44.78 |
| Zm00001d046900_P003 | Maize | mitochondrion | 43.8 | 44.44 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 39.42 | 41.54 |
| CDY16539 | Canola | endoplasmic reticulum | 39.42 | 40.91 |
| Bra002306.1-P | Field mustard | golgi | 39.42 | 40.91 |
| Bra020106.1-P | Field mustard | endoplasmic reticulum | 39.42 | 40.6 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 38.69 | 39.26 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 40.15 | 38.46 |
| Solyc11g069860.1.1 | Tomato | plastid | 40.15 | 38.46 |
| GSMUA_Achr1P24480_001 | Banana | cytosol | 24.82 | 32.08 |
| GSMUA_Achr4P01420_001 | Banana | cytosol | 22.63 | 28.18 |
| CDY45086 | Canola | endoplasmic reticulum | 37.23 | 27.72 |
| GSMUA_Achr1P11150_001 | Banana | cytosol, plastid | 24.82 | 27.64 |
| GSMUA_Achr11P... | Banana | mitochondrion | 31.39 | 25.44 |
| GSMUA_Achr3P18650_001 | Banana | extracellular | 16.79 | 23.71 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr1G23530_001 | EnsemblPlants:GSMUA_Achr1P23530_001 |
| EnsemblPlants:GSMUA_Achr1T23530_001 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | UniProt:M0S2G0 | PFAM:PF00462 |
| PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | SignalP:SignalP-TM |
| TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI0002964181 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G23530_001]
Coordinates
chr1:-:17890300..17892166
Molecular Weight (calculated)
14816.3 Da
IEP (calculated)
8.101
GRAVY (calculated)
0.342
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFLVLGVVL LAILSSGALL VAGHLPMSRT LLSTTSILFV RCCRRAKAVF KESKKAPSVV ELDQCEDGSQ IQDALSGMVG KHTVPQVFIH GKHLGGSDDI
101: VEAYESGRIL TLLGIDSKDK SLNDLSLIHQ SVRVWMS
101: VEAYESGRIL TLLGIDSKDK SLNDLSLIHQ SVRVWMS
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.