Factsheet for GSMUA_Achr11P03580_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	47.34	63.49
EES07538	Sorghum	endoplasmic reticulum, extracellular	46.15	61.9
TraesCS6A01G239400.1	Wheat	endoplasmic reticulum, extracellular	46.15	61.9
Os02t0646400-01	Rice	extracellular	46.75	60.31
VIT_04s0023g02800.t01	Wine grape	extracellular, vacuole	45.56	60.16
KRH76731	Soybean	extracellular, golgi	45.56	59.69
KRH28731	Soybean	endoplasmic reticulum, extracellular	45.56	59.69
Bra037174.1-P	Field mustard	extracellular, vacuole	42.01	52.99
CDY18599	Canola	extracellular, vacuole	42.01	52.99
CDX81399	Canola	extracellular, plasma membrane	42.01	52.21
Zm00001d017417_P001	Maize	cytosol	37.28	48.46
HORVU6Hr1G061200.1	Barley	cytosol, plastid	47.93	47.37
AT1G77370.2	Thale cress	extracellular	42.01	45.51
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.73	45.24
GSMUA_Achr1P10400_001	Banana	plastid	34.32	43.94
TraesCS6D01G221800.1	Wheat	cytosol	49.11	43.92
GSMUA_Achr1P24480_001	Banana	cytosol	24.26	38.68
GSMUA_Achr4P01420_001	Banana	cytosol	24.85	38.18
PGSC0003DMT400009308	Potato	mitochondrion	49.11	36.89
Solyc02g084660.2.1	Tomato	mitochondrion	48.52	36.44
GSMUA_Achr1P23530_001	Banana	extracellular	25.44	31.39
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	22.49	30.89
GSMUA_Achr3P18650_001	Banana	extracellular	17.16	29.9

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G03580_001	EnsemblPlants:GSMUA_Achr11P03580_001
EnsemblPlants:GSMUA_Achr11T03580_001	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M0RP38	PFAM:PF00462
PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000296E2FF	SEG:seg	:	:	:	:

Description

Monothiol glutaredoxin-S6 [Source:GMGC_GENE;Acc:GSMUA_Achr11G03580_001]

Coordinates

chr11:-:2567934..2570600

Molecular Weight (calculated)

18405.3 Da

IEP (calculated)

10.446

GRAVY (calculated)

-0.124

Length

169 amino acids

Sequence
(BLAST)

001: MGQVRLGPRT SVRLLQSKAD AATRQRCSSK PLHAPTMHRG RRLGITGLVV AVGLLLLGSA TEADRGSNSA AAFVQNVVYS NRIAIFSKSY CPYSLRAKRV
101: FSELQEKPFV IELDLRDDGR EIQNVLLDLV GRYTVPQVFI NGQHVGGSDE TLDALANGQL QKLLGKSSI

Best Arabidopsis Sequence Match ( AT1G77370.1 )
(BLAST)

001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.