Factsheet for PGSC0003DMT400009308

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
vacuole 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g084660.2.1	Tomato	mitochondrion	93.78	93.78
KRH28731	Soybean	endoplasmic reticulum, extracellular	37.33	65.12
KRH76731	Soybean	extracellular, golgi	37.33	65.12
VIT_04s0023g02800.t01	Wine grape	extracellular, vacuole	36.44	64.06
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	32.44	57.94
TraesCS6A01G239400.1	Wheat	endoplasmic reticulum, extracellular	32.0	57.14
Bra037174.1-P	Field mustard	extracellular, vacuole	33.78	56.72
CDY18599	Canola	extracellular, vacuole	33.78	56.72
CDX81399	Canola	extracellular, plasma membrane	34.22	56.62
EES07538	Sorghum	endoplasmic reticulum, extracellular	30.67	54.76
Os02t0646400-01	Rice	extracellular	31.56	54.2
GSMUA_Achr11P...	Banana	mitochondrion	36.89	49.11
AT1G77370.2	Thale cress	extracellular	32.89	47.44
HORVU6Hr1G061200.1	Barley	cytosol, plastid	34.67	45.61
Zm00001d017417_P001	Maize	cytosol	25.33	43.85
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	27.56	43.36
TraesCS6D01G221800.1	Wheat	cytosol	33.78	40.21
PGSC0003DMT400049116	Potato	cytosol	16.89	35.19
PGSC0003DMT400001269	Potato	cytosol	15.11	31.48
PGSC0003DMT400046764	Potato	plastid	15.56	28.0
PGSC0003DMT400051717	Potato	plastid	21.33	18.25

Protein Annotations

EntrezGene:102600419	MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M0ZW02	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400003617	PGSC:PGSC0003DMG400003617	EnsemblPlants:PGSC0003DMT400009308	PRINTS:PR00160
ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	TIGRFAMs:TIGR02180
TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI000296417E	RefSeq:XP_006340685.1	SEG:seg	:

Description

Glutaredoxin C3 [Source:PGSC_GENE;Acc:PGSC0003DMG400003617]

Coordinates

chr2:+:39890007..39892837

Molecular Weight (calculated)

25297.9 Da

IEP (calculated)

10.344

GRAVY (calculated)

-0.076

Length

225 amino acids

Sequence
(BLAST)

001: MQLNPAGRLT KIGNRRFGQY YNLSSKSGFR FSSSKTVISP KFPLLICNRL EKIGSINLRV YAETLKPVFL SFLSKTQQFF ERSTVRVIER EKMEVNGCFK
101: RNLLLMLTVF GVMAIVIGPT EALASSSPSA FVQNVIYSNK IAIFSKSYCP YCKRAKGIFN ELQEQPFVVE LDLRDDGARI QDVLLDLVGR STVPQVFVNG
201: KHIGGSDDLR NAVESGRLQS LLKKE

Best Arabidopsis Sequence Match ( AT1G77370.1 )
(BLAST)

001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.