CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76731	Soybean	extracellular, golgi	93.8	93.8
VIT_04s0023g02800.t01	Wine grape	extracellular, vacuole	63.57	64.06
CDX81399	Canola	extracellular, plasma membrane	64.34	61.03
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	58.14	59.52
TraesCS6A01G239400.1	Wheat	endoplasmic reticulum, extracellular	58.14	59.52
Bra037174.1-P	Field mustard	extracellular, vacuole	61.24	58.96
CDY18599	Canola	extracellular, vacuole	61.24	58.96
Os02t0646400-01	Rice	extracellular	57.36	56.49
EES07538	Sorghum	endoplasmic reticulum, extracellular	54.26	55.56
AT1G77370.2	Thale cress	extracellular	62.02	51.28
KRH37371	Soybean	endoplasmic reticulum	48.06	46.62
GSMUA_Achr11P...	Banana	mitochondrion	59.69	45.56
KRH12368	Soybean	endoplasmic reticulum	47.29	45.52
Zm00001d017417_P001	Maize	cytosol	43.41	43.08
HORVU6Hr1G061200.1	Barley	cytosol, plastid	56.59	42.69
TraesCS6D01G221800.1	Wheat	cytosol	58.91	40.21
PGSC0003DMT400009308	Potato	mitochondrion	65.12	37.33
Solyc02g084660.2.1	Tomato	mitochondrion	64.34	36.89
KRH07180	Soybean	cytosol	29.46	35.51
KRH32275	Soybean	plastid	34.88	27.11
KRH55649	Soybean	plastid	31.01	24.39
KRH19662	Soybean	plastid	30.23	23.49

Protein Annotations

EntrezGene:100500348	MapMan:18.8.2	Gene3D:3.40.30.10	EMBL:ACUP02006761	EMBL:BT091268	UniProt:C6T1G2
InterPro:GLR_AS	EnsemblPlantsGene:GLYMA_11G072200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	EnsemblPlants:KRH28731	ProteinID:KRH28731	ProteinID:KRH28731.1	PFAM:PF00462
PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833
SignalP:SignalP-noTM	TIGRFAMs:TIGR02180	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	UniParc:UPI0001B1589F	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:5386164..5387631

Molecular Weight (calculated)

14352.5 Da

IEP (calculated)

9.183

GRAVY (calculated)

0.271

Length

129 amino acids

Sequence
(BLAST)

001: MMRLRWSLVV TVTFAVLLFW IGSLQVQASN SVSAFVQNAI YSNRIAVFSK SYCPYCLRAK RLLAELNEKP FVVELDLRDD GYQIQSVLLD LIGRRTVPQV
101: FVNGKHIGGS DDLSAAVQSG ELQKLLSAS

Best Arabidopsis Sequence Match ( AT1G77370.1 )
(BLAST)

001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.