Factsheet for TraesCS6D01G221800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	66.14	99.21
TraesCS6A01G239400.1	Wheat	endoplasmic reticulum, extracellular	63.49	95.24
HORVU6Hr1G061200.1	Barley	cytosol, plastid	82.01	90.64
EES07538	Sorghum	endoplasmic reticulum, extracellular	53.44	80.16
Os02t0646400-01	Rice	extracellular	52.38	75.57
KRH28731	Soybean	endoplasmic reticulum, extracellular	40.21	58.91
KRH76731	Soybean	extracellular, golgi	39.68	58.14
VIT_04s0023g02800.t01	Wine grape	extracellular, vacuole	39.15	57.81
Zm00001d017417_P001	Maize	cytosol	38.62	56.15
CDX81399	Canola	extracellular, plasma membrane	39.68	55.15
CDY18599	Canola	extracellular, vacuole	38.1	53.73
Bra037174.1-P	Field mustard	extracellular, vacuole	38.1	53.73
GSMUA_Achr11P...	Banana	mitochondrion	43.92	49.11
AT1G77370.2	Thale cress	extracellular	39.68	48.08
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	33.86	47.41
PGSC0003DMT400009308	Potato	mitochondrion	40.21	33.78
Solyc02g084660.2.1	Tomato	mitochondrion	40.21	33.78
TraesCS2D01G361400.1	Wheat	plastid	22.75	33.33
TraesCS7D01G289300.1	Wheat	plastid	22.22	24.71

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:Glutaredoxin
InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf
EnsemblPlantsGene:TraesCS6D01G221800	EnsemblPlants:TraesCS6D01G221800.1	TIGR:cd03419	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:+:312771214..312773036

Molecular Weight (calculated)

20877.9 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.300

Length

189 amino acids

Sequence
(BLAST)

001: MGIKQSELFL RREFSPEDPP PGVTARRVSA PSFSAPPNQN SDLRPPESRS ATALPCHLEQ AREMSLIRIA FSLVLLLAAA ESVAATRSPS AFVQNAIYSN
101: RITIFSKSYC PYCMRAKRIF KDLNEDPYVV ELDLREDGRE IQGVLLDLVG RNTVPQVFVY GHHVGGSDDT KTALSDGQLQ KLLGKSQSQ

Best Arabidopsis Sequence Match ( AT1G77370.1 )
(BLAST)

001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS

Arabidopsis Description

Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.