Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18599 | Canola | extracellular, vacuole | 93.38 | 94.78 |
| AT1G77370.2 | Thale cress | extracellular | 81.62 | 71.15 |
| KRH28731 | Soybean | endoplasmic reticulum, extracellular | 61.03 | 64.34 |
| KRH76731 | Soybean | extracellular, golgi | 59.56 | 62.79 |
| VIT_04s0023g02800.t01 | Wine grape | extracellular, vacuole | 57.35 | 60.94 |
| TraesCS6A01G239400.1 | Wheat | endoplasmic reticulum, extracellular | 55.15 | 59.52 |
| Os02t0646400-01 | Rice | extracellular | 56.62 | 58.78 |
| TraesCS6B01G285100.1 | Wheat | endoplasmic reticulum, extracellular | 54.41 | 58.73 |
| EES07538 | Sorghum | endoplasmic reticulum, extracellular | 52.94 | 57.14 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 50.74 | 53.08 |
| CDY16539 | Canola | endoplasmic reticulum | 50.0 | 51.52 |
| Zm00001d017417_P001 | Maize | cytosol | 42.65 | 44.62 |
| HORVU6Hr1G061200.1 | Barley | cytosol, plastid | 53.68 | 42.69 |
| GSMUA_Achr11P... | Banana | mitochondrion | 52.21 | 42.01 |
| TraesCS6D01G221800.1 | Wheat | cytosol | 55.15 | 39.68 |
| CDY36849 | Canola | cytosol | 29.41 | 36.04 |
| CDY44566 | Canola | cytosol | 29.41 | 36.04 |
| CDY00348 | Canola | cytosol | 30.88 | 35.0 |
| CDY16750 | Canola | cytosol | 29.41 | 34.48 |
| CDY45086 | Canola | endoplasmic reticulum | 46.32 | 34.24 |
| PGSC0003DMT400009308 | Potato | mitochondrion | 56.62 | 34.22 |
| Solyc02g084660.2.1 | Tomato | mitochondrion | 56.62 | 34.22 |
| CDX84377 | Canola | cytosol | 30.15 | 34.17 |
| CDX87275 | Canola | cytosol | 28.68 | 33.62 |
| CDY16749 | Canola | cytosol | 30.88 | 33.6 |
| CDX87276 | Canola | cytosol | 30.88 | 33.6 |
| CDY15928 | Canola | cytosol | 30.15 | 26.28 |
| CDX99634 | Canola | cytosol | 30.15 | 26.28 |
| CDY06875 | Canola | plastid | 33.09 | 25.71 |
| CDY35215 | Canola | plastid | 32.35 | 25.43 |
| CDY31980 | Canola | plastid | 30.15 | 23.7 |
| CDY68269 | Canola | plastid | 30.88 | 23.46 |
| CDY50922 | Canola | plastid | 30.88 | 23.33 |
| CDX97456 | Canola | plastid | 30.88 | 23.2 |
| CDX92892 | Canola | plastid | 30.15 | 23.03 |
| CDY05731 | Canola | plastid | 28.68 | 22.41 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078CZI2 | EnsemblPlants:CDX81399 | ProteinID:CDX81399 | ProteinID:CDX81399.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00134981001 | InterPro:Glutaredoxin |
| InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 | PFscan:PS51354 |
| PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | TIGRFAMs:TIGR02180 | TMHMM:TMhelix |
| InterPro:Thioredoxin-like_sf | UniParc:UPI00018C711E | SEG:seg | : | : | : |
Description
BnaC09g08100D
Coordinates
chrLK031824:+:1540707..1541683
Molecular Weight (calculated)
15134.5 Da
IEP (calculated)
7.258
GRAVY (calculated)
0.161
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMVGQRPRR VEVTAVPILL ILVVVLSDLS ISVGAEKSVS AFVQNAILSN KIVIFSKSYC PYCLRSKRIF RELKEQPFVV ELDLREDGDQ IQYELLEFVG
101: RRTVPQVFVN GKHIGGSDDL ADAVENGQLQ KLLAAS
101: RRTVPQVFVN GKHIGGSDDL ADAVENGQLQ KLLAAS
001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS
Arabidopsis Description
Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.