CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31980	Canola	plastid	94.83	95.38
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	41.38	58.54
AT2G20270.2	Thale cress	plastid	68.39	57.77
KRH32275	Soybean	plastid	52.3	54.82
KRH19662	Soybean	plastid	51.15	53.61
CDY06875	Canola	plastid	53.45	53.14
HORVU7Hr1G064020.2	Barley	extracellular	24.71	53.09
KRH55649	Soybean	plastid	49.43	52.44
VIT_07s0005g04860.t01	Wine grape	plastid	53.45	52.25
CDY35215	Canola	plastid	51.72	52.02
CDY50922	Canola	plastid	51.15	49.44
CDX92892	Canola	plastid	50.57	49.44
CDY68269	Canola	plastid	50.57	49.16
Zm00001d031856_P002	Maize	plastid	46.55	48.5
CDX97456	Canola	plastid	50.0	48.07
Solyc06g083690.2.1	Tomato	plastid	49.43	46.99
TraesCS7B01G185700.1	Wheat	plastid	45.4	46.47
CDY36849	Canola	cytosol	29.31	45.95
CDY44566	Canola	cytosol	29.31	45.95
TraesCS7A01G293400.1	Wheat	plastid	44.83	45.88
TraesCS7D01G289300.1	Wheat	plastid	44.83	45.88
OQU80669	Sorghum	mitochondrion, plastid	40.23	45.45
Zm00001d049886_P001	Maize	plastid	45.4	44.38
CDY16750	Canola	cytosol	27.01	40.52
CDY16749	Canola	cytosol	28.74	40.0
CDY00348	Canola	cytosol	27.59	40.0
CDX84377	Canola	cytosol	27.59	40.0
CDX87275	Canola	cytosol	26.44	39.66
CDX87276	Canola	cytosol	27.59	38.4
CDX92459	Canola	endoplasmic reticulum, golgi	25.86	34.62
CDY16539	Canola	endoplasmic reticulum	25.86	34.09
PGSC0003DMT400051717	Potato	plastid	49.43	32.7
Os08t0565800-01	Rice	cytosol	32.18	32.0
CDY15928	Canola	cytosol	25.86	28.85
CDX99634	Canola	cytosol	25.86	28.85
CDX81399	Canola	extracellular, plasma membrane	22.41	28.68
CDY18599	Canola	extracellular, vacuole	21.84	28.36
HORVU7Hr1G064050.1	Barley	mitochondrion	25.29	25.73
CDY45086	Canola	endoplasmic reticulum	25.86	24.46

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078EWX3	EnsemblPlants:CDY05731	ProteinID:CDY05731	ProteinID:CDY05731.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00120781001
InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF14	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf
UniParc:UPI00018C711F	SEG:seg	:	:	:	:

Description

BnaC07g00720D

Coordinates

chrLK031964:-:436003..437623

Molecular Weight (calculated)

18707.5 Da

IEP (calculated)

8.865

GRAVY (calculated)

0.005

Length

174 amino acids

Sequence
(BLAST)

001: MAASANLGSL RSTTTSLFFT NRPFSLSMLR SSLVLRTCLI KPTPLRLVVS WPPHHGSSVR AMSSSSSSLE ETVKTTVAEN PVVVYSKSWC SYSSEVKSLF
101: NGLQVKPLVI ELDELGAEGS QLQNVLEKLT GQFTVPNVFI GGKHIGGCSD TLQLYNKGEL EPMLAAANAK TGQT

Best Arabidopsis Sequence Match ( AT2G20270.1 )
(BLAST)

001: MVAATVNLAN MTWTSLNSNP AISFSMLSGI RNLGMLPFRR CLKPTVIGIA SWPPLRCSSV KAMSSSSSSS GSTLEETVKT TVAENPVVVY SKTWCSYSSQ
101: VKSLFKSLQV EPLVVELDQL GSEGSQLQNV LEKITGQYTV PNVFIGGKHI GGCSDTLQLH NKGELEAILA EANGKNGQT

Arabidopsis Description

Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IUG7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.