Factsheet for Os08t0565800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0747400-01
Os02t0758000-01
Os06t0219500-00
Os06t0226700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28730.1	Os02t0747400-01	AT3G47620.1	21798944
AT4G28730.1	Os06t0226700-01	AT3G47620.1	21798944
AT4G28730.1	Os02t0758000-01	AT4G25200.1	21798944
AT4G28730.1	Os06t0219500-00	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G064020.2	Barley	extracellular	33.71	72.84
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	35.43	50.41
TraesCS7D01G289300.1	Wheat	plastid	42.29	43.53
TraesCS7B01G185700.1	Wheat	plastid	42.29	43.53
TraesCS7A01G293400.1	Wheat	plastid	42.29	43.53
Zm00001d031856_P002	Maize	plastid	41.14	43.11
OQU80669	Sorghum	mitochondrion, plastid	36.57	41.56
Os06t0659500-01	Rice	cytosol, plasma membrane	17.71	40.26
Zm00001d049886_P001	Maize	plastid	40.57	39.89
AT4G28730.1	Thale cress	plastid	36.57	36.78
KRH32275	Soybean	plastid	34.86	36.75
KRH55649	Soybean	plastid	34.29	36.59
CDX92892	Canola	plastid	37.14	36.52
CDY50922	Canola	plastid	36.57	35.56
Solyc06g083690.2.1	Tomato	plastid	37.14	35.52
VIT_07s0005g04860.t01	Wine grape	plastid	36.0	35.39
KRH19662	Soybean	plastid	33.14	34.94
CDY68269	Canola	plastid	35.43	34.64
Bra010351.1-P	Field mustard	plastid	35.43	34.64
CDX97456	Canola	plastid	35.43	34.25
CDY35215	Canola	plastid	32.57	32.95
Bra011056.1-P	Field mustard	plastid	32.57	32.95
Bra024183.1-P	Field mustard	plastid	31.43	32.74
CDY06875	Canola	plastid	32.57	32.57
CDY31980	Canola	plastid	32.0	32.37
CDY05731	Canola	plastid	32.0	32.18
Os04t0508300-01	Rice	extracellular	20.57	32.14
Bra036458.1-P	Field mustard	plastid	28.0	29.34
Os02t0618100-01	Rice	plasma membrane	21.14	28.91
AT2G20270.2	Thale cress	plastid	31.43	26.7
PGSC0003DMT400051717	Potato	plastid	36.57	24.33
Os02t0646400-01	Rice	extracellular	16.57	22.14

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EntrezGene:9269420	UniProt:A0A0P0XJN9	ProteinID:BAT06753.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	EnsemblPlantsGene:Os08g0565800	EnsemblPlants:Os08t0565800-01
PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF14	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0000DD95FB	SEG:seg	:	:	:

Description

GLUTAREDOXIN 21Glutaredoxin. (Os08t0565800-01);Similar to Glutaredoxin. (Os08t0565800-02)

Coordinates

chr8:+:28343339..28345526

Molecular Weight (calculated)

19257.6 Da

IEP (calculated)

11.304

GRAVY (calculated)

-0.287

Length

175 amino acids

Sequence
(BLAST)

001: SRRRDTYRSI HPPPAIPPIP SITNAAAEPH PLPPSRGRPW PPLLFLLPAS SSPSLPLRRT PRQVPRHQGL LLLSGFLLRL ADGGLCQEDA RRQPRRHLLQ
101: VLVLVVQPHV IELDQLGAQG PQLQKVLERL TGQSTVPNVF IGGKHIGGCT DTVKLHRKGE LATMLSELDI DVNNS

Best Arabidopsis Sequence Match ( AT4G28730.1 )
(BLAST)

001: MAVTAFNTLK LVSSSLDPIP SVSCSSYSFS LIYVGSPYKR CLKQSCSVRA MTSSSSAASS SSSSFGSRME ESIRKTVTEN TVVIYSKTWC SYCTEVKTLF
101: KRLGVQPLVV ELDQLGPQGP QLQKVLERLT GQHTVPNVFV CGKHIGGCTD TVKLNRKGDL ELMLAEANGK NGQS

Arabidopsis Description

GRXC5GrxC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UXL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.