Factsheet for AT2G20270.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31980	Canola	plastid	57.77	68.79
CDY05731	Canola	plastid	57.77	68.39
Bra036458.1-P	Field mustard	plastid	54.37	67.07
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	34.95	58.54
KRH32275	Soybean	plastid	44.66	55.42
KRH19662	Soybean	plastid	42.23	52.41
KRH55649	Soybean	plastid	41.26	51.83
AT4G28730.1	Thale cress	plastid	43.69	51.72
HORVU7Hr1G064020.2	Barley	extracellular	19.9	50.62
VIT_07s0005g04860.t01	Wine grape	plastid	43.2	50.0
Solyc06g083690.2.1	Tomato	plastid	41.26	46.45
Zm00001d031856_P002	Maize	plastid	36.89	45.51
OQU80669	Sorghum	mitochondrion, plastid	33.5	44.81
TraesCS7B01G185700.1	Wheat	plastid	36.89	44.71
TraesCS7A01G293400.1	Wheat	plastid	36.41	44.12
TraesCS7D01G289300.1	Wheat	plastid	36.41	44.12
Zm00001d049886_P001	Maize	plastid	35.92	41.57
AT5G63030.1	Thale cress	cytosol	22.82	37.6
PGSC0003DMT400051717	Potato	plastid	43.2	33.84
AT5G40370.2	Thale cress	cytosol	22.33	33.82
AT5G20500.1	Thale cress	endoplasmic reticulum	21.36	32.59
Os08t0565800-01	Rice	cytosol	26.7	31.43
AT1G77370.2	Thale cress	extracellular	21.36	28.21
HORVU7Hr1G064050.1	Barley	mitochondrion	21.36	25.73

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EntrezGene:816546	ProteinID:AEC06988.1	ArrayExpress:AT2G20270	EnsemblPlantsGene:AT2G20270
RefSeq:AT2G20270	TAIR:AT2G20270	RefSeq:AT2G20270-TAIR-G	EnsemblPlants:AT2G20270.2	TAIR:AT2G20270.2	Unigene:At.39720
UniProt:F4IUG7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109
RefSeq:NP_001189560.1	PFAM:PF00462	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF14	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001E92CB2	SEG:seg	:

Description

Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IUG7]

Coordinates

chr2:-:8737786..8739660

Molecular Weight (calculated)

22274.9 Da

IEP (calculated)

8.947

GRAVY (calculated)

0.014

Length

206 amino acids

Sequence
(BLAST)

001: MVAATVNLAN MTWTSLNSNP AISFSMLSGI RNLGMLPFRR CLKPTVIGIA SWPPLRCSSV KAMSSSSSSS GSTLEETVKT TVAENPVVVY SKTWCSYSSQ
101: VKSLFKSLQV EPLVVELDQL VSLGKTSLPH DIGLKHLQKF WWFLAFPGSE GSQLQNVLEK ITGQYTVPNV FIGGKHIGGC SDTLQLHNKG ELEAILAEAN
201: GKNGQT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.