Factsheet for Bra010351.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013872.1-P
Bra018126.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G28730.1	Bra018126.1-P	AT3G47620.1	21798944
AT4G28730.1	Bra013872.1-P	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68269	Canola	plastid	99.44	99.44
AT4G28730.1	Thale cress	plastid	77.65	79.89
Bra024183.1-P	Field mustard	plastid	73.18	77.98
Bra011056.1-P	Field mustard	plastid	74.3	76.88
GSMUA_Achr1P11150_001	Banana	cytosol, plastid	47.49	69.11
HORVU7Hr1G064020.2	Barley	extracellular	27.37	60.49
KRH32275	Soybean	plastid	52.51	56.63
OQU80669	Sorghum	mitochondrion, plastid	48.04	55.84
Zm00001d031856_P002	Maize	plastid	51.4	55.09
VIT_07s0005g04860.t01	Wine grape	plastid	54.75	55.06
Solyc06g083690.2.1	Tomato	plastid	55.87	54.64
KRH19662	Soybean	plastid	49.72	53.61
KRH55649	Soybean	plastid	48.6	53.05
TraesCS7A01G293400.1	Wheat	plastid	50.28	52.94
TraesCS7B01G185700.1	Wheat	plastid	50.28	52.94
TraesCS7D01G289300.1	Wheat	plastid	50.28	52.94
Zm00001d049886_P001	Maize	plastid	51.4	51.69
Bra036458.1-P	Field mustard	plastid	43.58	46.71
Bra025584.1-P	Field mustard	cytosol	26.82	43.24
Bra035868.1-P	Field mustard	cytosol	27.37	42.24
Bra035867.1-P	Field mustard	cytosol	27.37	39.2
Bra038602.1-P	Field mustard	cytosol	25.7	38.33
Bra020106.1-P	Field mustard	endoplasmic reticulum	27.93	37.59
PGSC0003DMT400051717	Potato	plastid	54.75	37.26
Bra002306.1-P	Field mustard	golgi	26.26	35.61
Os08t0565800-01	Rice	cytosol	34.64	35.43
Bra037174.1-P	Field mustard	extracellular, vacuole	22.91	30.6
Bra030333.1-P	Field mustard	cytosol	26.26	30.13
HORVU7Hr1G064050.1	Barley	mitochondrion	28.49	29.82

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra010351	EnsemblPlants:Bra010351.1	EnsemblPlants:Bra010351.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	UniProt:M4D1K1
PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF14	SUPFAM:SSF52833
TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI0002545487	SEG:seg	:	:

Description

AT4G28730 (E=4e-041) | glutaredoxin family protein

Coordinates

chrA08:-:14031297..14032421

Molecular Weight (calculated)

19353.6 Da

IEP (calculated)

9.992

GRAVY (calculated)

0.018

Length

179 amino acids

Sequence
(BLAST)

001: MAVTTFNTLR LVSSSLDSIP SISFSTSYSL SLISVGGITC SDVKRCLKHT CSVRAMSSSS AASSSSFGSR MEESVKKTVT ENVVVVYSKT WCSYCIEVKT
101: LFKRLGVQPL VIELNELGPQ GPQLQKVLER LTGQRTVPNV FVGGKHIGGC TDTVKLKRKG DLALMLAEAN GKTDQILRK

Best Arabidopsis Sequence Match ( AT4G28730.1 )
(BLAST)

001: MAVTAFNTLK LVSSSLDPIP SVSCSSYSFS LIYVGSPYKR CLKQSCSVRA MTSSSSAASS SSSSFGSRME ESIRKTVTEN TVVIYSKTWC SYCTEVKTLF
101: KRLGVQPLVV ELDQLGPQGP QLQKVLERLT GQHTVPNVFV CGKHIGGCTD TVKLNRKGDL ELMLAEANGK NGQS

Arabidopsis Description

GRXC5GrxC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UXL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.