Factsheet for Bra025584.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
mitochondrion 2
plastid 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44566	Canola	cytosol	100.0	100.0
CDY36849	Canola	cytosol	99.1	99.1
PGSC0003DMT400049116	Potato	cytosol	70.27	72.22
Solyc06g005260.2.1	Tomato	extracellular	70.27	72.22
GSMUA_Achr1P24480_001	Banana	cytosol	67.57	70.75
VIT_14s0066g00960.t01	Wine grape	cytosol	70.27	68.42
GSMUA_Achr4P01420_001	Banana	cytosol	66.67	67.27
Os04t0508300-01	Rice	extracellular	67.57	66.96
KRH07180	Soybean	cytosol	63.06	65.42
PGSC0003DMT400001269	Potato	cytosol	63.06	64.81
EES05437	Sorghum	cytosol	62.16	60.0
TraesCS2A01G363600.1	Wheat	plastid	66.67	57.36
Bra035868.1-P	Field mustard	cytosol	59.46	56.9
Bra038602.1-P	Field mustard	cytosol	61.26	56.67
AT5G40370.2	Thale cress	cytosol	69.37	56.62
Bra035867.1-P	Field mustard	cytosol	63.06	56.0
TraesCS2D01G361400.1	Wheat	plastid	64.86	55.81
TraesCS2B01G381600.1	Wheat	plastid	65.77	55.73
Zm00001d003081_P003	Maize	mitochondrion	65.77	55.73
EES11094	Sorghum	plastid	63.96	55.47
Bra030333.1-P	Field mustard	cytosol	77.48	55.13
Os02t0618100-01	Rice	plasma membrane	63.06	54.69
Zm00001d017240_P001	Maize	cytosol, extracellular	61.26	51.52
Bra020106.1-P	Field mustard	endoplasmic reticulum	41.44	34.59
Bra002306.1-P	Field mustard	golgi	39.64	33.33
Bra011056.1-P	Field mustard	plastid	46.85	30.06
Bra037174.1-P	Field mustard	extracellular, vacuole	35.14	29.1
Bra036458.1-P	Field mustard	plastid	41.44	27.54
Bra010351.1-P	Field mustard	plastid	43.24	26.82
Bra024183.1-P	Field mustard	plastid	36.94	24.4

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra025584	EnsemblPlants:Bra025584.1	EnsemblPlants:Bra025584.1-P	InterPro:GLR_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109
UniProt:M4E9X7	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI0001D842F0	SEG:seg

Description

AT5G40370 (E=1e-042) | glutaredoxin, putative

Coordinates

chrA04:-:7695713..7697279

Molecular Weight (calculated)

11770.2 Da

IEP (calculated)

7.347

GRAVY (calculated)

0.046

Length

111 amino acids

Sequence
(BLAST)

001: MAMQKAKEIV SGNAVVVFSK SFCPYCVRVK ELLQQLGAKF IAVELDKESD GSQVQSALAE WTGQRTVPNV FIGEKHIGGC DSVTNLHRDG KLVPMLTEAG
101: AIAATAGTTS S

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.