Factsheet for Zm00001d017240_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05437	Sorghum	cytosol	82.58	94.78
GSMUA_Achr1P24480_001	Banana	cytosol	58.33	72.64
GSMUA_Achr4P01420_001	Banana	cytosol	59.09	70.91
KRH07180	Soybean	cytosol	56.06	69.16
Solyc06g005260.2.1	Tomato	extracellular	56.06	68.52
PGSC0003DMT400049116	Potato	cytosol	56.06	68.52
Os02t0618100-01	Rice	plasma membrane	65.91	67.97
PGSC0003DMT400001269	Potato	cytosol	55.3	67.59
VIT_14s0066g00960.t01	Wine grape	cytosol	56.06	64.91
Zm00001d003081_P003	Maize	mitochondrion	63.64	64.12
Bra025584.1-P	Field mustard	cytosol	51.52	61.26
CDY44566	Canola	cytosol	51.52	61.26
CDY36849	Canola	cytosol	51.52	61.26
AT5G40370.2	Thale cress	cytosol	50.0	48.53
CDY15928	Canola	cytosol	51.52	43.59
CDX99634	Canola	cytosol	51.52	43.59
Bra030333.1-P	Field mustard	cytosol	51.52	43.59
Zm00001d046900_P003	Maize	mitochondrion	31.06	30.37
Zm00001d017417_P001	Maize	cytosol	24.24	24.62
Zm00001d031856_P002	Maize	plastid	28.03	22.16
Zm00001d049886_P001	Maize	plastid	28.79	21.35

Protein Annotations

EntrezGene:100303864	MapMan:18.8.2	Gene3D:3.40.30.10	ProteinID:AQK72651.1	UniProt:B6SN61	EMBL:EU954176
InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr
InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI000182B1A9	EnsemblPlantsGene:Zm00001d017240
EnsemblPlants:Zm00001d017240_P001	EnsemblPlants:Zm00001d017240_T001	SEG:seg	:	:	:

Description

Grx_C2.1-glutaredoxin subgroup I

Coordinates

chr5:+:190054668..190058015

Molecular Weight (calculated)

13932.9 Da

IEP (calculated)

8.058

GRAVY (calculated)

0.114

Length

132 amino acids

Sequence
(BLAST)

001: MALEKAKEII ASSPVDLALR KAKETVASHP VVVFSKTYCP FCTRVKQLLA KLGASYKAIE LDVESDGAEL QSALAEWTGQ RTVPNVFVKG ERIGGCDATM
101: AMHDGGKLVP LLTEAGAIVT ARATATTTTP SL

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.