CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
mitochondrion 2
plastid 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025584.1-P	Field mustard	cytosol	100.0	100.0
CDY36849	Canola	cytosol	99.1	99.1
PGSC0003DMT400049116	Potato	cytosol	70.27	72.22
Solyc06g005260.2.1	Tomato	extracellular	70.27	72.22
GSMUA_Achr1P24480_001	Banana	cytosol	67.57	70.75
VIT_14s0066g00960.t01	Wine grape	cytosol	70.27	68.42
GSMUA_Achr4P01420_001	Banana	cytosol	66.67	67.27
Os04t0508300-01	Rice	extracellular	67.57	66.96
KRH07180	Soybean	cytosol	63.06	65.42
PGSC0003DMT400001269	Potato	cytosol	63.06	64.81
EES05437	Sorghum	cytosol	62.16	60.0
TraesCS2A01G363600.1	Wheat	plastid	66.67	57.36
CDY16750	Canola	cytosol	59.46	56.9
CDY00348	Canola	cytosol	61.26	56.67
AT5G40370.2	Thale cress	cytosol	69.37	56.62
CDY16749	Canola	cytosol	63.06	56.0
CDX84377	Canola	cytosol	60.36	55.83
TraesCS2D01G361400.1	Wheat	plastid	64.86	55.81
CDX99634	Canola	cytosol	78.38	55.77
Zm00001d003081_P003	Maize	mitochondrion	65.77	55.73
TraesCS2B01G381600.1	Wheat	plastid	65.77	55.73
EES11094	Sorghum	plastid	63.96	55.47
CDY15928	Canola	cytosol	77.48	55.13
Os02t0618100-01	Rice	plasma membrane	63.06	54.69
CDX87276	Canola	cytosol	61.26	54.4
CDX87275	Canola	cytosol	56.76	54.31
Zm00001d017240_P001	Maize	cytosol, extracellular	61.26	51.52
CDX92459	Canola	endoplasmic reticulum, golgi	39.64	33.85
CDY16539	Canola	endoplasmic reticulum	39.64	33.33
CDY06875	Canola	plastid	49.55	31.43
CDY31980	Canola	plastid	47.75	30.64
CDY35215	Canola	plastid	46.85	30.06
CDX81399	Canola	extracellular, plasma membrane	36.04	29.41
CDY05731	Canola	plastid	45.95	29.31
CDY18599	Canola	extracellular, vacuole	35.14	29.1
CDX97456	Canola	plastid	45.05	27.62
CDY68269	Canola	plastid	44.14	27.37
CDX92892	Canola	plastid	43.24	26.97
CDY50922	Canola	plastid	43.24	26.67
CDY45086	Canola	endoplasmic reticulum	37.84	22.83

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078I3Y3	UniProt:A0A078I3Y3	EnsemblPlants:CDY44566	ProteinID:CDY44566
ProteinID:CDY44566.1	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00080479001	InterPro:Glutaredoxin
InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	ScanProsite:PS00195
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF122	SUPFAM:SSF52833	TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf
UniParc:UPI0001D842F0	SEG:seg	:	:	:	:

Description

BnaA04g10240DBnaA04g10240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3Y3]

Coordinates

chrLK032595:+:264..2172

Molecular Weight (calculated)

11770.2 Da

IEP (calculated)

7.347

GRAVY (calculated)

0.046

Length

111 amino acids

Sequence
(BLAST)

001: MAMQKAKEIV SGNAVVVFSK SFCPYCVRVK ELLQQLGAKF IAVELDKESD GSQVQSALAE WTGQRTVPNV FIGEKHIGGC DSVTNLHRDG KLVPMLTEAG
101: AIAATAGTTS S

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.