Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 6
- extracellular 5
- endoplasmic reticulum 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037174.1-P | Field mustard | extracellular, vacuole | 100.0 | 100.0 |
| CDX81399 | Canola | extracellular, plasma membrane | 94.78 | 93.38 |
| AT1G77370.2 | Thale cress | extracellular | 80.6 | 69.23 |
| KRH28731 | Soybean | endoplasmic reticulum, extracellular | 58.96 | 61.24 |
| KRH76731 | Soybean | extracellular, golgi | 57.46 | 59.69 |
| VIT_04s0023g02800.t01 | Wine grape | extracellular, vacuole | 56.72 | 59.38 |
| TraesCS6A01G239400.1 | Wheat | endoplasmic reticulum, extracellular | 55.22 | 58.73 |
| TraesCS6B01G285100.1 | Wheat | endoplasmic reticulum, extracellular | 54.48 | 57.94 |
| Os02t0646400-01 | Rice | extracellular | 55.97 | 57.25 |
| EES07538 | Sorghum | endoplasmic reticulum, extracellular | 52.24 | 55.56 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 51.49 | 53.08 |
| CDY16539 | Canola | endoplasmic reticulum | 50.75 | 51.52 |
| Zm00001d017417_P001 | Maize | cytosol | 42.54 | 43.85 |
| HORVU6Hr1G061200.1 | Barley | cytosol, plastid | 53.73 | 42.11 |
| GSMUA_Achr11P... | Banana | mitochondrion | 52.99 | 42.01 |
| TraesCS6D01G221800.1 | Wheat | cytosol | 53.73 | 38.1 |
| CDY00348 | Canola | cytosol | 32.09 | 35.83 |
| CDY16750 | Canola | cytosol | 30.6 | 35.34 |
| CDY36849 | Canola | cytosol | 29.1 | 35.14 |
| CDY44566 | Canola | cytosol | 29.1 | 35.14 |
| CDX84377 | Canola | cytosol | 31.34 | 35.0 |
| CDX87275 | Canola | cytosol | 29.85 | 34.48 |
| CDY16749 | Canola | cytosol | 32.09 | 34.4 |
| CDX87276 | Canola | cytosol | 32.09 | 34.4 |
| CDY45086 | Canola | endoplasmic reticulum | 47.01 | 34.24 |
| PGSC0003DMT400009308 | Potato | mitochondrion | 56.72 | 33.78 |
| Solyc02g084660.2.1 | Tomato | mitochondrion | 56.72 | 33.78 |
| CDX99634 | Canola | cytosol | 29.85 | 25.64 |
| CDY15928 | Canola | cytosol | 29.85 | 25.64 |
| CDY06875 | Canola | plastid | 32.84 | 25.14 |
| CDY35215 | Canola | plastid | 32.09 | 24.86 |
| CDY31980 | Canola | plastid | 29.85 | 23.12 |
| CDY68269 | Canola | plastid | 30.6 | 22.91 |
| CDY50922 | Canola | plastid | 30.6 | 22.78 |
| CDX97456 | Canola | plastid | 30.6 | 22.65 |
| CDX92892 | Canola | plastid | 29.85 | 22.47 |
| CDY05731 | Canola | plastid | 28.36 | 21.84 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078FZJ2 | UniProt:A0A078FZJ2 | EnsemblPlants:CDY18599 | ProteinID:CDY18599 |
| ProteinID:CDY18599.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00005652001 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir |
| InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 |
| PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI0002541C98 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g07960DBnaA09g07960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZJ2]
Coordinates
chrLK032087:-:132250..133488
Molecular Weight (calculated)
14895.2 Da
IEP (calculated)
8.228
GRAVY (calculated)
0.106
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGHRPRRVE VTAVHILLIL AVVLSDLSIS AGAEKSVAAF VQNAILSNKI VIFSKSYCPY CLRSKRIFRE LKEQPFVVEL DLREDGDKIQ YELLEFVGRR
101: TVPQVFVNGK HIGGSDDLAD SVENGQLQKL LAAS
101: TVPQVFVNGK HIGGSDDLAD SVENGQLQKL LAAS
001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS
Arabidopsis Description
Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.