Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G285100.1 | Wheat | endoplasmic reticulum, extracellular | 80.95 | 80.95 |
| Os02t0646400-01 | Rice | extracellular | 84.13 | 80.92 |
| TraesCS6A01G239400.1 | Wheat | endoplasmic reticulum, extracellular | 80.16 | 80.16 |
| HORVU6Hr1G061200.1 | Barley | cytosol, plastid | 79.37 | 58.48 |
| Zm00001d017417_P001 | Maize | cytosol | 60.32 | 58.46 |
| VIT_04s0023g02800.t01 | Wine grape | extracellular, vacuole | 55.56 | 54.69 |
| KRH76731 | Soybean | extracellular, golgi | 55.56 | 54.26 |
| KRH28731 | Soybean | endoplasmic reticulum, extracellular | 55.56 | 54.26 |
| TraesCS6D01G221800.1 | Wheat | cytosol | 80.16 | 53.44 |
| CDX81399 | Canola | extracellular, plasma membrane | 57.14 | 52.94 |
| CDY18599 | Canola | extracellular, vacuole | 55.56 | 52.24 |
| Bra037174.1-P | Field mustard | extracellular, vacuole | 55.56 | 52.24 |
| GSMUA_Achr11P... | Banana | mitochondrion | 61.9 | 46.15 |
| AT1G77370.2 | Thale cress | extracellular | 57.14 | 46.15 |
| EER88767 | Sorghum | mitochondrion | 46.83 | 43.7 |
| EES05437 | Sorghum | cytosol | 29.37 | 32.17 |
| EES11094 | Sorghum | plastid | 32.54 | 32.03 |
| PGSC0003DMT400009308 | Potato | mitochondrion | 54.76 | 30.67 |
| Solyc02g084660.2.1 | Tomato | mitochondrion | 54.76 | 30.67 |
| OQU80669 | Sorghum | mitochondrion, plastid | 29.37 | 24.03 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:8075160 | UniProt:C5XS39 | EnsemblPlants:EES07538 | ProteinID:EES07538 |
| ProteinID:EES07538.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr |
| InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 |
| EnsemblPlantsGene:SORBI_3004G300900 | SUPFAM:SSF52833 | unigene:Sbi.19712 | SignalP:SignalP-noTM | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0001A860AB | RefSeq:XP_002454562.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:63961289..63963913
Molecular Weight (calculated)
14014.8 Da
IEP (calculated)
9.144
GRAVY (calculated)
-0.102
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVRLAFPV FFLLAAAEFA AATRSPSAFV QNAIYSNRIT IFSKTYCPHS MRAKRIFRDL KEDPYVVELD TREDGRDIQN VLLDLVGRRT VPQVFVNGQH
101: VGGADDTVNA LSNGQLEKLL GKSQSQ
101: VGGADDTVNA LSNGQLEKLL GKSQSQ
001: MVDQSPRRVV VAALLLFVVL CDLSNSAGAA NSVSAFVQNA ILSNKIVIFS KSYCPYCLRS KRIFSQLKEE PFVVELDQRE DGDQIQYELL EFVGRRTVPQ
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS
101: VFVNGKHIGG SDDLGAALES GQLQKLLAAS
Arabidopsis Description
Glutaredoxin family protein [Source:TAIR;Acc:AT1G77370]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.