Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- vacuole 5
- extracellular 5
- endoplasmic reticulum 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g069860.1.1 | Tomato | plastid | 90.91 | 90.91 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 22.38 | 72.73 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 41.26 | 71.08 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 36.36 | 67.53 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 59.44 | 65.38 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 28.67 | 65.08 |
| Bra002306.1-P | Field mustard | golgi | 59.44 | 64.39 |
| CDY16539 | Canola | endoplasmic reticulum | 58.74 | 63.64 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 55.24 | 62.7 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 58.74 | 62.22 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 58.74 | 61.76 |
| Bra020106.1-P | Field mustard | endoplasmic reticulum | 57.34 | 61.65 |
| KRH12368 | Soybean | endoplasmic reticulum | 55.94 | 59.7 |
| KRH37371 | Soybean | endoplasmic reticulum | 55.24 | 59.4 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 54.55 | 57.78 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 53.15 | 56.3 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 53.15 | 56.3 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 53.85 | 56.2 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 51.75 | 56.06 |
| EER88767 | Sorghum | mitochondrion | 51.75 | 54.81 |
| Zm00001d046900_P003 | Maize | mitochondrion | 51.75 | 54.81 |
| CDY45086 | Canola | endoplasmic reticulum | 52.45 | 40.76 |
| PGSC0003DMT400049116 | Potato | cytosol | 30.77 | 40.74 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 38.46 | 40.15 |
| PGSC0003DMT400001269 | Potato | cytosol | 29.37 | 38.89 |
| PGSC0003DMT400046764 | Potato | plastid | 27.27 | 31.2 |
| PGSC0003DMT400009308 | Potato | mitochondrion | 43.36 | 27.56 |
| PGSC0003DMT400051717 | Potato | plastid | 31.47 | 17.11 |
Protein Annotations
| EntrezGene:102591615 | MapMan:18.8.2 | Gene3D:3.40.30.10 | InterPro:GLR_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 |
| GO:GO:0005794 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | UniProt:M1AE31 | PFAM:PF00462 | EnsemblPlantsGene:PGSC0003DMG400008049 |
| PGSC:PGSC0003DMG400008049 | EnsemblPlants:PGSC0003DMT400020793 | PRINTS:PR00160 | ScanProsite:PS00195 | PFscan:PS51354 | PANTHER:PTHR10168 |
| PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02180 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI0002962298 |
| RefSeq:XP_006340202.1 | SEG:seg | : | : | : | : |
Description
Glutaredoxin-C4 [Source:PGSC_GENE;Acc:PGSC0003DMG400008049]
Coordinates
chr11:-:41721857..41726381
Molecular Weight (calculated)
15562.5 Da
IEP (calculated)
6.782
GRAVY (calculated)
0.012
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSTAFSSS TSFSSIPIFL IIVSVTVLLY ASTIVEAGDS SAFVKKTISS HSIVIFSKSY CPYCRKAKAV FKELNQKPHV VELDERDDGW SIQDAISEIV
101: GRRTVPQVFI NGKHIGGSDD TIDAYENGNL AKLLGVNSKN DDL
101: GRRTVPQVFI NGKHIGGSDD TIDAYENGNL AKLLGVNSKN DDL
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.