Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G110720.1 | Barley | cytosol | 47.79 | 78.31 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 44.12 | 77.92 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 25.0 | 77.27 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 33.09 | 71.43 |
| CDX92459 | Canola | endoplasmic reticulum, golgi | 66.18 | 69.23 |
| CDY16539 | Canola | endoplasmic reticulum | 66.18 | 68.18 |
| Bra002306.1-P | Field mustard | golgi | 65.44 | 67.42 |
| Bra020106.1-P | Field mustard | endoplasmic reticulum | 65.44 | 66.92 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.03 | 65.87 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 64.71 | 65.19 |
| KRH37371 | Soybean | endoplasmic reticulum | 62.5 | 63.91 |
| KRH12368 | Soybean | endoplasmic reticulum | 61.76 | 62.69 |
| Solyc11g069860.1.1 | Tomato | plastid | 63.97 | 60.84 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 59.56 | 60.0 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 59.56 | 60.0 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 58.82 | 59.26 |
| EER88767 | Sorghum | mitochondrion | 58.82 | 59.26 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 61.76 | 58.74 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 58.82 | 58.39 |
| Zm00001d046900_P003 | Maize | mitochondrion | 56.62 | 57.04 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 55.15 | 56.82 |
| VIT_04s0023g02800.t01 | Wine grape | extracellular, vacuole | 49.26 | 52.34 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 47.06 | 46.72 |
| CDY45086 | Canola | endoplasmic reticulum | 59.56 | 44.02 |
| VIT_14s0066g00960.t01 | Wine grape | cytosol | 32.35 | 38.6 |
| VIT_17s0000g08670.t01 | Wine grape | cytosol | 34.56 | 37.9 |
| VIT_07s0005g04860.t01 | Wine grape | plastid | 33.82 | 25.84 |
Protein Annotations
| EntrezGene:100241059 | wikigene:100241059 | MapMan:18.8.2 | Gene3D:3.40.30.10 | ProteinID:CBI17872 | ProteinID:CBI17872.3 |
| UniProt:D7SQE1 | EMBL:FN594964 | InterPro:GLR_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | EntrezGene:LOC100241059 | wikigene:LOC100241059 | PFAM:PF00462 |
| PRINTS:PR00160 | ScanProsite:PS00195 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 |
| SignalP:SignalP-noTM | TIGR:TC56235 | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001BE17CB | ArrayExpress:VIT_11s0052g00500 |
| EnsemblPlantsGene:VIT_11s0052g00500 | EnsemblPlants:VIT_11s0052g00500.t01 | unigene:Vvi.3233 | RefSeq:XP_002266525 | RefSeq:XP_002266525.1 | SEG:seg |
Description
No Description!
Coordinates
chr11:-:17896163..17899701
Molecular Weight (calculated)
14702.4 Da
IEP (calculated)
5.160
GRAVY (calculated)
-0.092
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCGITLTLF VLTASLCLPS SAAADHSSSD AAADFVKKTI SSHKIAIFSK SYCPYCKRAK AVFKELNQVP YVVELDQRED GWNIQDALSG MVGRRTVPQV
101: FINGKHIGGS DDTVEAYQSG DLAKLLGIAE EDSDDL
101: FINGKHIGGS DDTVEAYQSG DLAKLLGIAE EDSDDL
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.