Factsheet for TraesCS7B01G404000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	98.52	98.52
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	98.52	98.52
HORVU7Hr1G110720.1	Barley	cytosol	60.0	97.59
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	97.04	95.62
HORVU7Hr1G009480.1	Barley	cytosol	31.11	95.45
Os06t0659500-01	Rice	cytosol, plasma membrane	50.37	88.31
HORVU3Hr1G028600.1	Barley	cytosol	40.0	85.71
EER88767	Sorghum	mitochondrion	83.7	83.7
Zm00001d046900_P003	Maize	mitochondrion	81.48	81.48
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.41	72.22
GSMUA_Achr1P10400_001	Banana	plastid	61.48	62.88
CDX92459	Canola	endoplasmic reticulum, golgi	57.78	60.0
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	59.26	58.82
Bra002306.1-P	Field mustard	golgi	57.04	58.33
KRH37371	Soybean	endoplasmic reticulum	57.04	57.89
CDY16539	Canola	endoplasmic reticulum	56.3	57.58
AT5G20500.1	Thale cress	endoplasmic reticulum	57.04	57.04
KRH12368	Soybean	endoplasmic reticulum	55.56	55.97
Bra020106.1-P	Field mustard	endoplasmic reticulum	54.81	55.64
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	57.78	54.55
Solyc11g069860.1.1	Tomato	plastid	56.3	53.15
TraesCS6B01G285100.1	Wheat	endoplasmic reticulum, extracellular	47.41	50.79
GSMUA_Achr1P23530_001	Banana	extracellular	45.93	45.26
TraesCS2B01G381600.1	Wheat	plastid	35.56	36.64
CDY45086	Canola	endoplasmic reticulum	48.15	35.33
TraesCS7B01G185700.1	Wheat	plastid	39.26	31.18

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	InterPro:GLR_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0005794
GO:GO:0008150	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
InterPro:Glutaredoxin	InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160
ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	SignalP:SignalP-TM
TIGRFAMs:TIGR02180	TMHMM:TMhelix	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS7B01G404000	EnsemblPlants:TraesCS7B01G404000.1	TIGR:cd03419
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:672386150..672389618

Molecular Weight (calculated)

14654.5 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.081

Length

135 amino acids

Sequence
(BLAST)

001: MASTTFRRFS VAAAAAAFIA LAAFGSASAS KTAFVKSTVK AHDVVIFSKS YCPYCKRAKA VFKELELKKD PYVVELDQRE DGGEIQDALS DMVGRRTVPQ
101: VFIRGKHLGG SDDTVDAYEN GELAKLLNIS VKDDL

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.