Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- vacuole 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g112770.2.1 | Tomato | plastid | 94.4 | 94.4 |
| VIT_17s0000g08670.t01 | Wine grape | cytosol | 68.0 | 68.55 |
| Bra038602.1-P | Field mustard | cytosol | 64.8 | 67.5 |
| CDY00348 | Canola | cytosol | 64.8 | 67.5 |
| CDX84377 | Canola | cytosol | 64.0 | 66.67 |
| Bra035867.1-P | Field mustard | cytosol | 65.6 | 65.6 |
| CDY16749 | Canola | cytosol | 65.6 | 65.6 |
| AT5G63030.1 | Thale cress | cytosol | 64.8 | 64.8 |
| CDX87276 | Canola | cytosol | 64.0 | 64.0 |
| CDY16750 | Canola | cytosol | 57.6 | 62.07 |
| Bra035868.1-P | Field mustard | cytosol | 56.8 | 61.21 |
| PGSC0003DMT400049116 | Potato | cytosol | 52.0 | 60.19 |
| GSMUA_Achr3P18650_001 | Banana | extracellular | 45.6 | 58.76 |
| CDX87275 | Canola | cytosol | 53.6 | 57.76 |
| PGSC0003DMT400001269 | Potato | cytosol | 49.6 | 57.41 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 31.2 | 27.27 |
| PGSC0003DMT400051717 | Potato | plastid | 35.2 | 16.73 |
| PGSC0003DMT400009308 | Potato | mitochondrion | 28.0 | 15.56 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EMBL:AB679830 | ProteinID:ABU96709 | ProteinID:ABU96709.1 | ProteinID:BAM15272 |
| ProteinID:BAM15272.1 | EMBL:EF635996 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir |
| InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | UniProt:M1BJK3 | PFAM:PF00462 | EnsemblPlantsGene:PGSC0003DMG400018157 | PGSC:PGSC0003DMG400018157 |
| EnsemblPlants:PGSC0003DMT400046764 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF73 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI000294BD13 | : | : | : |
Description
Glutaredoxin [Source:PGSC_GENE;Acc:PGSC0003DMG400018157]
Coordinates
chr3:+:52559498..52562549
Molecular Weight (calculated)
13742.6 Da
IEP (calculated)
7.346
GRAVY (calculated)
-0.222
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMFSSPQF TKEQMEIALT KAKQVVSSNP VVVFSKTYCG YCTRVKQLLS QLGATFKVIE LDQESDGDEV QQALLEWTRQ RTVPNVFIGG EHVGGCDSVL
101: EKHQQGKLLP MLKDAAAIPN NPAKV
101: EKHQQGKLLP MLKDAAAIPN NPAKV
001: MGSMFSGNRM SKEEMEVVVN KAKEIVSAYP VVVFSKTYCG YCQRVKQLLT QLGATFKVLE LDEMSDGGEI QSALSEWTGQ TTVPNVFIKG NHIGGCDRVM
101: ETNKQGKLVP LLTEAGAIAD NSSQL
101: ETNKQGKLVP LLTEAGAIAD NSSQL
Arabidopsis Description
GRXC1Glutaredoxin-C1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8T2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.