Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92803 | Soybean | cytosol | 96.22 | 96.22 |
| AT5G27320.1 | Thale cress | cytosol | 78.78 | 78.78 |
| CDX80665 | Canola | cytosol | 78.2 | 78.2 |
| PGSC0003DMT400073501 | Potato | cytosol | 79.07 | 78.16 |
| Bra009970.1-P | Field mustard | cytosol | 78.2 | 77.97 |
| CDY16687 | Canola | cytosol | 78.2 | 77.97 |
| Solyc01g098390.2.1 | Tomato | cytosol | 78.78 | 77.65 |
| AT3G05120.1 | Thale cress | cytosol | 77.03 | 76.81 |
| CDY41936 | Canola | cytosol | 75.0 | 74.35 |
| CDY27795 | Canola | cytosol | 74.42 | 73.99 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 80.81 | 73.74 |
| KRH67123 | Soybean | cytosol | 73.55 | 73.12 |
| KRH71503 | Soybean | cytosol | 72.67 | 73.1 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 64.53 | 72.55 |
| KRH31953 | Soybean | cytosol | 71.51 | 71.72 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 61.63 | 69.51 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 61.92 | 69.16 |
| GSMUA_Achr10P... | Banana | cytosol | 62.21 | 69.03 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 60.76 | 68.08 |
| Bra039460.1-P | Field mustard | cytosol | 74.71 | 64.9 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 61.92 | 63.02 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 61.63 | 59.89 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 61.34 | 59.6 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 61.34 | 59.44 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 61.34 | 59.44 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 60.17 | 59.14 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 60.76 | 59.04 |
| KXG21982 | Sorghum | cytosol | 60.76 | 58.87 |
| Zm00001d038165_P003 | Maize | cytosol | 59.88 | 58.69 |
| KRH09280 | Soybean | plastid | 41.57 | 42.31 |
| KRH38783 | Soybean | plastid | 39.83 | 40.65 |
| KRH09281 | Soybean | plastid | 38.37 | 39.05 |
| KRH38784 | Soybean | plastid | 39.83 | 37.95 |
| KRH09282 | Soybean | extracellular | 35.76 | 37.16 |
| KRH56173 | Soybean | cytosol | 31.1 | 32.52 |
| KRH25344 | Soybean | peroxisome | 27.91 | 31.27 |
| KRH68056 | Soybean | cytosol | 28.49 | 30.25 |
| KRH32935 | Soybean | cytosol | 29.07 | 30.12 |
| KRG91414 | Soybean | cytosol | 28.78 | 30.09 |
| KRG91413 | Soybean | endoplasmic reticulum | 29.36 | 29.97 |
| KRH38655 | Soybean | cytosol | 28.2 | 29.94 |
| KRG96320 | Soybean | cytosol | 28.2 | 29.94 |
| KRH71756 | Soybean | cytosol | 28.49 | 29.52 |
| KRH20616 | Soybean | cytosol | 23.26 | 29.3 |
| KRH09175 | Soybean | cytosol, plastid | 27.03 | 29.25 |
| KRH35975 | Soybean | cytosol | 26.45 | 28.8 |
| KRH56206 | Soybean | cytosol | 28.2 | 28.7 |
| KRH05152 | Soybean | cytosol | 25.58 | 28.48 |
| KRH48319 | Soybean | nucleus | 27.62 | 28.44 |
| KRH01780 | Soybean | cytosol | 27.91 | 28.24 |
| KRG90787 | Soybean | cytosol, mitochondrion | 28.78 | 28.12 |
| KRH48318 | Soybean | cytosol | 25.87 | 27.9 |
| KRH46912 | Soybean | cytosol | 28.78 | 27.35 |
| KRH65207 | Soybean | cytosol | 25.29 | 27.27 |
| KRH09176 | Soybean | endoplasmic reticulum | 19.48 | 26.27 |
| KRH62746 | Soybean | cytosol | 23.55 | 25.88 |
| KRH38654 | Soybean | cytosol | 21.51 | 25.43 |
| KRH38658 | Soybean | extracellular | 7.27 | 17.86 |
Protein Annotations
| EntrezGene:100815161 | MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | EMBL:ACUP02006567 |
| EnsemblPlantsGene:GLYMA_10G158000 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 |
| GO:GO:0009987 | GO:GO:0010325 | GO:GO:0010331 | GO:GO:0016787 | GO:GO:0048444 | UniProt:I1LBF7 |
| InterPro:IPR029058 | EnsemblPlants:KRH33997 | ProteinID:KRH33997 | ProteinID:KRH33997.1 | ProteinID:KRH33998.1 | InterPro:Lipase_GDXG_HIS_AS |
| InterPro:Lipase_GDXG_put_SER_AS | PFAM:PF07859 | ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF227 |
| SUPFAM:SSF53474 | UniParc:UPI000233CAD4 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:39204866..39207599
Molecular Weight (calculated)
38893.4 Da
IEP (calculated)
6.944
GRAVY (calculated)
-0.258
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSNELNPN DSKMVVPLNM WVLISNFKLA YNLLRRPDGT FNRDLAEFLD RKVPANANPV DRVFSFDVVV DRETNLLTRI YRPTEGEERS VNILDLEKPV
101: SSEVVPVIIF FHGGSFAHSS ANSAIYDTLC RRLVGICKAV VVSVNYRRAP ENRYPCAYDD GWTALKWVSS RSWLQSKKDK KVHIYLAGDS SGGNIVHHVA
201: LKAVESGIEV FGNILLNPLF GGQERTESEK RLDGRYFVRV KDRDWYWRAF LPEGEDRDHH ACNPFGPKGK SLEGITFPKS LVVVAGLDLV QDWQLGYAKG
301: LEKAGQEVKL IFLEQATIGF YLLPNNEHFS PVMDEIKYFV SSDC
101: SSEVVPVIIF FHGGSFAHSS ANSAIYDTLC RRLVGICKAV VVSVNYRRAP ENRYPCAYDD GWTALKWVSS RSWLQSKKDK KVHIYLAGDS SGGNIVHHVA
201: LKAVESGIEV FGNILLNPLF GGQERTESEK RLDGRYFVRV KDRDWYWRAF LPEGEDRDHH ACNPFGPKGK SLEGITFPKS LVVVAGLDLV QDWQLGYAKG
301: LEKAGQEVKL IFLEQATIGF YLLPNNEHFS PVMDEIKYFV SSDC
001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Arabidopsis Description
GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.