Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013465_P001 | |
| Zm00001d016973_P001 | |
| Zm00001d033680_P001 | |
| Zm00001d050903_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21982 | Sorghum | cytosol | 95.73 | 94.65 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 89.46 | 89.71 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 82.34 | 81.41 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 82.05 | 81.36 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 82.05 | 81.36 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 82.05 | 81.36 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 81.77 | 80.85 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 60.4 | 69.28 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 59.83 | 68.18 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 59.54 | 68.08 |
| GSMUA_Achr10P... | Banana | cytosol | 60.11 | 68.06 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 58.69 | 67.54 |
| AT5G27320.1 | Thale cress | cytosol | 61.82 | 63.08 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 60.4 | 62.72 |
| CDX80665 | Canola | cytosol | 60.97 | 62.21 |
| Bra009970.1-P | Field mustard | cytosol | 60.97 | 62.03 |
| AT3G05120.1 | Thale cress | cytosol | 60.68 | 61.74 |
| CDY16687 | Canola | cytosol | 60.68 | 61.74 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 60.11 | 61.34 |
| CDY27795 | Canola | cytosol | 60.11 | 60.98 |
| Solyc06g008870.2.1 | Tomato | cytosol | 59.54 | 60.58 |
| KRH71503 | Soybean | cytosol | 58.97 | 60.53 |
| PGSC0003DMT400056562 | Potato | cytosol | 59.26 | 60.29 |
| CDY41936 | Canola | cytosol | 59.54 | 60.23 |
| KRH31953 | Soybean | cytosol | 58.69 | 60.06 |
| PGSC0003DMT400009831 | Potato | cytosol | 58.97 | 60.0 |
| KRG92803 | Soybean | cytosol | 58.69 | 59.88 |
| KRH33997 | Soybean | cytosol | 58.69 | 59.88 |
| PGSC0003DMT400073501 | Potato | cytosol | 58.97 | 59.48 |
| Solyc01g098390.2.1 | Tomato | cytosol | 58.4 | 58.74 |
| Solyc09g074270.2.1 | Tomato | cytosol | 57.55 | 58.55 |
| CDY67478 | Canola | cytosol | 59.26 | 58.1 |
| CDY63333 | Canola | cytosol | 58.97 | 57.82 |
| KRH67123 | Soybean | cytosol | 56.98 | 57.8 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 61.54 | 57.29 |
| Bra007722.1-P | Field mustard | cytosol | 58.4 | 57.26 |
| CDX89165 | Canola | cytosol | 58.12 | 56.67 |
| AT3G63010.1 | Thale cress | cytosol | 57.55 | 56.42 |
| CDX67913 | Canola | cytosol | 57.55 | 56.42 |
| Bra003520.1-P | Field mustard | cytosol | 57.55 | 56.42 |
| CDY70667 | Canola | cytosol | 57.27 | 56.15 |
| Bra040420.1-P | Field mustard | cytosol | 57.55 | 56.11 |
| CDX93945 | Canola | extracellular, golgi | 54.99 | 54.21 |
| Bra039460.1-P | Field mustard | cytosol | 60.11 | 53.28 |
| Zm00001d007257_P001 | Maize | plastid | 35.9 | 36.42 |
| Zm00001d022323_P001 | Maize | cytosol, mitochondrion | 33.62 | 34.4 |
| Zm00001d022326_P001 | Maize | cytosol | 33.33 | 34.31 |
| Zm00001d018857_P001 | Maize | cytosol, extracellular | 30.48 | 32.62 |
| Zm00001d022320_P001 | Maize | plastid | 33.05 | 32.58 |
| Zm00001d007258_P001 | Maize | mitochondrion | 32.76 | 32.58 |
| Zm00001d022317_P001 | Maize | mitochondrion, plastid | 32.19 | 32.19 |
| Zm00001d022327_P001 | Maize | plasma membrane | 32.48 | 31.93 |
| Zm00001d013099_P001 | Maize | extracellular | 30.2 | 31.27 |
| Zm00001d008634_P001 | Maize | cytosol | 29.34 | 31.12 |
| Zm00001d022101_P001 | Maize | cytosol | 27.35 | 31.07 |
| Zm00001d039795_P001 | Maize | cytosol | 21.94 | 29.73 |
| Zm00001d018853_P001 | Maize | cytosol, plastid | 29.06 | 29.57 |
| Zm00001d007909_P001 | Maize | plastid | 28.49 | 29.15 |
| Zm00001d008635_P001 | Maize | cytosol | 28.21 | 29.12 |
| Zm00001d032036_P001 | Maize | extracellular | 27.07 | 28.88 |
| Zm00001d022372_P001 | Maize | cytosol | 20.23 | 28.86 |
| Zm00001d007908_P001 | Maize | cytosol | 27.92 | 28.66 |
| Zm00001d018854_P001 | Maize | cytosol | 28.49 | 28.49 |
| Zm00001d018848_P001 | Maize | cytosol | 27.07 | 28.36 |
| Zm00001d018855_P001 | Maize | extracellular | 29.34 | 27.99 |
| Zm00001d039799_P001 | Maize | cytosol | 26.5 | 27.43 |
| Zm00001d020032_P001 | Maize | peroxisome | 26.78 | 27.17 |
| Zm00001d047883_P001 | Maize | mitochondrion | 27.92 | 26.49 |
| Zm00001d038177_P001 | Maize | cytosol | 23.65 | 26.18 |
| Zm00001d038178_P001 | Maize | cytosol | 26.5 | 25.91 |
| Zm00001d028440_P001 | Maize | peroxisome | 23.65 | 25.08 |
| Zm00001d010284_P001 | Maize | cytosol | 25.93 | 24.86 |
Protein Annotations
| EntrezGene:103630348 | MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | UniProt:A0A1D6M449 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 |
| ProteinID:AQK85906.1 | ProteinID:AQK85907.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | InterPro:IPR029058 | InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS | PFAM:PF07859 | ScanProsite:PS01173 |
| ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF227 | SUPFAM:SSF53474 | UniParc:UPI000221450F | EnsemblPlantsGene:Zm00001d038165 |
| EnsemblPlants:Zm00001d038165_P003 | EnsemblPlants:Zm00001d038165_T003 | SEG:seg | : | : | : |
Description
Putative GID1-like gibberellin receptor
Coordinates
chr6:+:150159097..150161690
Molecular Weight (calculated)
38625.5 Da
IEP (calculated)
6.789
GRAVY (calculated)
-0.299
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSDEVNRN ECKGAVPIHT WVLISNFKLA YNMLRRADGT FDRDLAEFLD RRVPPDARAQ EGVSSSDHVI DTSTGLEVRI YRAATNNGGA GAAAVTLPIL
101: DFLGGGPSPD PFPVILFFHG GSFAHSSSGT AIYDNLCRRF VKLSKGVVVS VNYRRAPEHR YPCAYDDGWA ALKWATSQPF LRSGGDGRPR VFLSGDSSGG
201: NIAHHVAVRA ADAGINICGN ILLNAMFGGT ERTESERRLD GKYFVTLQDR DWYWKAYLPE DADRDHPACN PFGPNGRRLR GLPFTKSLII VSGLDLTCDR
301: QLAYAEGLQQ DGHHVKVVYR EKATVGFYLL SNTDHYHEVM EEIGDFLAAN L
101: DFLGGGPSPD PFPVILFFHG GSFAHSSSGT AIYDNLCRRF VKLSKGVVVS VNYRRAPEHR YPCAYDDGWA ALKWATSQPF LRSGGDGRPR VFLSGDSSGG
201: NIAHHVAVRA ADAGINICGN ILLNAMFGGT ERTESERRLD GKYFVTLQDR DWYWKAYLPE DADRDHPACN PFGPNGRRLR GLPFTKSLII VSGLDLTCDR
301: QLAYAEGLQQ DGHHVKVVYR EKATVGFYLL SNTDHYHEVM EEIGDFLAAN L
001: MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
101: GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
201: RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
301: KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Arabidopsis Description
GID1CGID1C [Source:UniProtKB/TrEMBL;Acc:A0A178UKX0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.