Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63333 | Canola | cytosol | 91.9 | 91.9 |
| CDY67478 | Canola | cytosol | 91.62 | 91.62 |
| CDX89165 | Canola | cytosol | 91.62 | 91.11 |
| Bra040420.1-P | Field mustard | cytosol | 91.06 | 90.56 |
| Bra007722.1-P | Field mustard | cytosol | 90.5 | 90.5 |
| Bra003520.1-P | Field mustard | cytosol | 88.83 | 88.83 |
| CDX67913 | Canola | cytosol | 88.55 | 88.55 |
| CDY70667 | Canola | cytosol | 87.71 | 87.71 |
| CDX93945 | Canola | extracellular, golgi | 86.31 | 86.8 |
| VIT_07s0104g00930.t01 | Wine grape | cytosol | 76.82 | 79.94 |
| Solyc06g008870.2.1 | Tomato | cytosol | 75.98 | 78.84 |
| PGSC0003DMT400056562 | Potato | cytosol | 75.7 | 78.55 |
| PGSC0003DMT400009831 | Potato | cytosol | 74.58 | 77.39 |
| Solyc09g074270.2.1 | Tomato | cytosol | 73.18 | 75.94 |
| KRH71503 | Soybean | cytosol | 72.35 | 75.73 |
| KRH31953 | Soybean | cytosol | 71.23 | 74.34 |
| KRH67123 | Soybean | cytosol | 69.83 | 72.25 |
| AT5G27320.1 | Thale cress | cytosol | 67.88 | 70.64 |
| AT3G05120.1 | Thale cress | cytosol | 66.48 | 68.99 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 56.7 | 66.34 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 56.42 | 65.8 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 56.42 | 65.58 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 55.87 | 65.57 |
| GSMUA_Achr10P... | Banana | cytosol | 56.42 | 65.16 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 59.22 | 59.89 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 56.15 | 59.47 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 58.1 | 58.59 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 57.82 | 58.47 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 56.98 | 58.29 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 57.54 | 58.03 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 57.26 | 57.91 |
| KXG21982 | Sorghum | cytosol | 57.26 | 57.75 |
| Zm00001d038165_P003 | Maize | cytosol | 56.42 | 57.55 |
| AT5G23530.1 | Thale cress | cytosol | 34.36 | 36.72 |
| AT5G16080.1 | Thale cress | cytosol | 29.33 | 30.52 |
| AT5G06570.3 | Thale cress | cytosol | 27.65 | 28.78 |
| AT5G62180.1 | Thale cress | cytosol | 26.26 | 28.75 |
| AT2G45600.1 | Thale cress | cytosol | 26.26 | 28.57 |
| AT2G45610.1 | Thale cress | cytosol | 25.14 | 27.78 |
| AT1G68620.1 | Thale cress | cytosol | 25.7 | 27.38 |
Protein Annotations
| MapMan:11.6.2.1 | Gene3D:3.40.50.1820 | EntrezGene:825476 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | ProteinID:AEE80423.1 |
| EMBL:AK228182 | ArrayExpress:AT3G63010 | EnsemblPlantsGene:AT3G63010 | RefSeq:AT3G63010 | TAIR:AT3G63010 | RefSeq:AT3G63010-TAIR-G |
| EnsemblPlants:AT3G63010.1 | TAIR:AT3G63010.1 | Symbol:ATGID1B | Unigene:At.47986 | EMBL:BT028997 | ProteinID:CAB87746.1 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 | GO:GO:0009653 |
| GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 | GO:GO:0009987 |
| GO:GO:0010331 | GO:GO:0010476 | GO:GO:0010629 | GO:GO:0016787 | GO:GO:0048444 | GO:GO:0048530 |
| GO:GO:1905516 | InterPro:IPR029058 | InterPro:Lipase_GDXG_HIS_AS | InterPro:Lipase_GDXG_put_SER_AS | RefSeq:NP_191860.1 | PFAM:PF07859 |
| PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006340 | PO:PO:0007022 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF353 |
| UniProt:Q9LYC1 | SUPFAM:SSF53474 | UniParc:UPI00000A3D4D | : | : | : |
Description
GID1BGibberellin receptor GID1B [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC1]
Coordinates
chr3:+:23289243..23291486
Molecular Weight (calculated)
40301.9 Da
IEP (calculated)
7.355
GRAVY (calculated)
-0.237
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
101: STTEIVPVLI FFHGGSFTHS SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD SNVYVYLAGD SSGGNIAHNV
201: AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD
301: GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.