Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G27320.1 | Thale cress | cytosol | 85.51 | 85.76 |
| CDY41936 | Canola | cytosol | 85.22 | 84.73 |
| CDY27795 | Canola | cytosol | 84.64 | 84.39 |
| KRH33997 | Soybean | cytosol | 76.81 | 77.03 |
| KRG92803 | Soybean | cytosol | 76.52 | 76.74 |
| PGSC0003DMT400073501 | Potato | cytosol | 76.81 | 76.15 |
| Solyc01g098390.2.1 | Tomato | cytosol | 76.52 | 75.64 |
| Bra039460.1-P | Field mustard | cytosol | 85.22 | 74.24 |
| VIT_14s0030g00440.t01 | Wine grape | cytosol | 80.58 | 73.74 |
| GSMUA_Achr3P24930_001 | Banana | cytosol | 62.03 | 69.93 |
| GSMUA_Achr8P05910_001 | Banana | cytosol | 60.0 | 67.87 |
| GSMUA_Achr5P27430_001 | Banana | cytosol | 60.0 | 67.21 |
| AT3G63010.1 | Thale cress | cytosol | 68.99 | 66.48 |
| GSMUA_Achr10P... | Banana | cytosol | 59.42 | 66.13 |
| GSMUA_Achr6P16090_001 | Banana | cytosol | 58.84 | 66.12 |
| TraesCS1B01G265900.1 | Wheat | cytosol | 63.77 | 61.97 |
| GSMUA_Achr5P27450_001 | Banana | mitochondrion | 60.58 | 61.83 |
| Os05t0407500-01 | Rice | cytosol, nucleus | 63.19 | 61.58 |
| Zm00001d010308_P001 | Maize | cytosol, plastid | 62.32 | 61.43 |
| TraesCS1A01G255100.1 | Wheat | cytosol | 63.19 | 61.41 |
| HORVU1Hr1G060810.1 | Barley | cytosol | 62.9 | 61.3 |
| TraesCS1D01G254500.1 | Wheat | cytosol | 62.9 | 61.3 |
| KXG21982 | Sorghum | cytosol | 62.61 | 60.85 |
| Zm00001d038165_P003 | Maize | cytosol | 61.74 | 60.68 |
| AT5G23530.1 | Thale cress | cytosol | 35.36 | 36.42 |
| AT1G68620.1 | Thale cress | cytosol | 29.28 | 30.06 |
| AT2G45610.1 | Thale cress | cytosol | 26.67 | 28.4 |
| AT5G06570.3 | Thale cress | cytosol | 28.12 | 28.2 |
| AT5G62180.1 | Thale cress | cytosol | 26.67 | 28.13 |
| AT5G16080.1 | Thale cress | cytosol | 27.54 | 27.62 |
| AT2G45600.1 | Thale cress | cytosol | 25.8 | 27.05 |
Protein Annotations
| MapMan:11.6.2.1 | PDB:2ZSH | PDB:2ZSI | Gene3D:3.40.50.1820 | EntrezGene:819674 | UniProt:A0A178VM30 |
| ProteinID:AAF27018.1 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_3 | ProteinID:AEE74188.1 | ArrayExpress:AT3G05120 | EnsemblPlantsGene:AT3G05120 |
| RefSeq:AT3G05120 | TAIR:AT3G05120 | RefSeq:AT3G05120-TAIR-G | EnsemblPlants:AT3G05120.1 | TAIR:AT3G05120.1 | Symbol:ATGID1A |
| EMBL:AY136305 | Unigene:At.18371 | Unigene:At.74127 | EMBL:BT002605 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009739 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009939 | GO:GO:0009987 | GO:GO:0010331 | GO:GO:0010476 |
| GO:GO:0016787 | GO:GO:0048444 | GO:GO:0048530 | GO:GO:1905516 | InterPro:IPR029058 | InterPro:Lipase_GDXG_HIS_AS |
| InterPro:Lipase_GDXG_put_SER_AS | RefSeq:NP_187163.1 | ProteinID:OAP06481.1 | PFAM:PF07859 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006340 | PO:PO:0007022 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PO:PO:0025374 |
| ScanProsite:PS01173 | ScanProsite:PS01174 | PANTHER:PTHR23024 | PANTHER:PTHR23024:SF227 | UniProt:Q9MAA7 | MEROPS:S09.A10 |
| SUPFAM:SSF53474 | UniParc:UPI00000AC731 | : | : | : | : |
Description
GID1AGID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]
Coordinates
chr3:+:1430363..1432844
Molecular Weight (calculated)
38619.9 Da
IEP (calculated)
6.600
GRAVY (calculated)
-0.199
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASDEVNLI ESRTVVPLNT WVLISNFKVA YNILRRPDGT FNRHLAEYLD RKVTANANPV DGVFSFDVLI DRRINLLSRV YRPAYADQEQ PPSILDLEKP
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
101: VDGDIVPVIL FFHGGSFAHS SANSAIYDTL CRRLVGLCKC VVVSVNYRRA PENPYPCAYD DGWIALNWVN SRSWLKSKKD SKVHIFLAGD SSGGNIAHNV
201: ALRAGESGID VLGNILLNPM FGGNERTESE KSLDGKYFVT VRDRDWYWKA FLPEGEDREH PACNPFSPRG KSLEGVSFPK SLVVVAGLDL IRDWQLAYAE
301: GLKKAGQEVK LMHLEKATVG FYLLPNNNHF HNVMDEISAF VNAEC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.